Gene : Thecc1EG003220 T. cacao v1.1
Defline:  (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Genomic Order:  2311
Name:  ? Thecc1EG003220 Secondary Identifier:  ? PAC:27433632
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003220 0.5kb upstream 0.5kb upstream 5520 true scaffold_1: 20770150-20775669 Theobroma cacao
Thecc1EG003220 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 20775170-20775669 Theobroma cacao
Thecc1EG003220 0.5kb downstream 0.5kb downstream 5520 true scaffold_1: 20769650-20775169 Theobroma cacao
Thecc1EG003220 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 20769650-20770149 Theobroma cacao
Thecc1EG003220 1.0kb upstream 1.0kb upstream 6020 true scaffold_1: 20770150-20776169 Theobroma cacao
Thecc1EG003220 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 20775170-20776169 Theobroma cacao
Thecc1EG003220 1.0kb downstream 1.0kb downstream 6020 true scaffold_1: 20769150-20775169 Theobroma cacao
Thecc1EG003220 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 20769150-20770149 Theobroma cacao
Thecc1EG003220 2.0kb upstream 2.0kb upstream 7020 true scaffold_1: 20770150-20777169 Theobroma cacao
Thecc1EG003220 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 20775170-20777169 Theobroma cacao
Thecc1EG003220 2.0kb downstream 2.0kb downstream 7020 true scaffold_1: 20768150-20775169 Theobroma cacao
Thecc1EG003220 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 20768150-20770149 Theobroma cacao
Thecc1EG003220 5.0kb upstream 5.0kb upstream 10020 true scaffold_1: 20770150-20780169 Theobroma cacao
Thecc1EG003220 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 20775170-20780169 Theobroma cacao
Thecc1EG003220 5.0kb downstream 5.0kb downstream 10020 true scaffold_1: 20765150-20775169 Theobroma cacao
Thecc1EG003220 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 20765150-20770149 Theobroma cacao
Thecc1EG003220 10.0kb upstream 10.0kb upstream 15020 true scaffold_1: 20770150-20785169 Theobroma cacao
Thecc1EG003220 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 20775170-20785169 Theobroma cacao
Thecc1EG003220 10.0kb downstream 10.0kb downstream 15020 true scaffold_1: 20760150-20775169 Theobroma cacao
Thecc1EG003220 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 20760150-20770149 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782467 5273 Angiosperm View MSA
123823827 5264 Brassicales-Malvales View MSA
124319883 5266 SBM View MSA
124168384 5268 Malvidae View MSA
124041168 5270 Rosid View MSA
123752904 5271 Pentapetalae View MSA
122774849 5272 Eudicot View MSA
121351013 5274 Embryophyte View MSA
123381971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain