Gene : Thecc1EG003118 T. cacao v1.1
Defline:  (1 of 3) PTHR31232:SF7 - S PROTEIN HOMOLOGUE 74-RELATED Genomic Order:  2275
Name:  ? Thecc1EG003118 Secondary Identifier:  ? PAC:27433936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003118 0.5kb upstream 0.5kb upstream 1184 true scaffold_1: 19405404-19406587 Theobroma cacao
Thecc1EG003118 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19405404-19405903 Theobroma cacao
Thecc1EG003118 0.5kb downstream 0.5kb downstream 1184 true scaffold_1: 19405904-19407087 Theobroma cacao
Thecc1EG003118 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19406588-19407087 Theobroma cacao
Thecc1EG003118 1.0kb upstream 1.0kb upstream 1684 true scaffold_1: 19404904-19406587 Theobroma cacao
Thecc1EG003118 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19404904-19405903 Theobroma cacao
Thecc1EG003118 1.0kb downstream 1.0kb downstream 1684 true scaffold_1: 19405904-19407587 Theobroma cacao
Thecc1EG003118 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19406588-19407587 Theobroma cacao
Thecc1EG003118 2.0kb upstream 2.0kb upstream 2684 true scaffold_1: 19403904-19406587 Theobroma cacao
Thecc1EG003118 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19403904-19405903 Theobroma cacao
Thecc1EG003118 2.0kb downstream 2.0kb downstream 2684 true scaffold_1: 19405904-19408587 Theobroma cacao
Thecc1EG003118 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19406588-19408587 Theobroma cacao
Thecc1EG003118 5.0kb upstream 5.0kb upstream 5684 true scaffold_1: 19400904-19406587 Theobroma cacao
Thecc1EG003118 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19400904-19405903 Theobroma cacao
Thecc1EG003118 5.0kb downstream 5.0kb downstream 5684 true scaffold_1: 19405904-19411587 Theobroma cacao
Thecc1EG003118 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19406588-19411587 Theobroma cacao
Thecc1EG003118 10.0kb upstream 10.0kb upstream 10684 true scaffold_1: 19395904-19406587 Theobroma cacao
Thecc1EG003118 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19395904-19405903 Theobroma cacao
Thecc1EG003118 10.0kb downstream 10.0kb downstream 10684 true scaffold_1: 19405904-19416587 Theobroma cacao
Thecc1EG003118 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19406588-19416587 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826591 5264 Brassicales-Malvales View MSA
124348268 5266 SBM View MSA
124250294 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain