Gene : Thecc1EG002957 T. cacao v1.1
Defline:  (1 of 1) KOG4159 - Predicted E3 ubiquitin ligase Genomic Order:  2216
Name:  ? Thecc1EG002957 Secondary Identifier:  ? PAC:27434665
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002957 0.5kb upstream 0.5kb upstream 4228 true scaffold_1: 17663524-17667751 Theobroma cacao
Thecc1EG002957 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17667252-17667751 Theobroma cacao
Thecc1EG002957 0.5kb downstream 0.5kb downstream 4228 true scaffold_1: 17663024-17667251 Theobroma cacao
Thecc1EG002957 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17663024-17663523 Theobroma cacao
Thecc1EG002957 1.0kb upstream 1.0kb upstream 4728 true scaffold_1: 17663524-17668251 Theobroma cacao
Thecc1EG002957 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17667252-17668251 Theobroma cacao
Thecc1EG002957 1.0kb downstream 1.0kb downstream 4728 true scaffold_1: 17662524-17667251 Theobroma cacao
Thecc1EG002957 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17662524-17663523 Theobroma cacao
Thecc1EG002957 2.0kb upstream 2.0kb upstream 5728 true scaffold_1: 17663524-17669251 Theobroma cacao
Thecc1EG002957 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17667252-17669251 Theobroma cacao
Thecc1EG002957 2.0kb downstream 2.0kb downstream 5728 true scaffold_1: 17661524-17667251 Theobroma cacao
Thecc1EG002957 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17661524-17663523 Theobroma cacao
Thecc1EG002957 5.0kb upstream 5.0kb upstream 8728 true scaffold_1: 17663524-17672251 Theobroma cacao
Thecc1EG002957 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17667252-17672251 Theobroma cacao
Thecc1EG002957 5.0kb downstream 5.0kb downstream 8728 true scaffold_1: 17658524-17667251 Theobroma cacao
Thecc1EG002957 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17658524-17663523 Theobroma cacao
Thecc1EG002957 10.0kb upstream 10.0kb upstream 13728 true scaffold_1: 17663524-17677251 Theobroma cacao
Thecc1EG002957 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17667252-17677251 Theobroma cacao
Thecc1EG002957 10.0kb downstream 10.0kb downstream 13728 true scaffold_1: 17653524-17667251 Theobroma cacao
Thecc1EG002957 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17653524-17663523 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836090 5264 Brassicales-Malvales View MSA
124350084 5266 SBM View MSA
124245890 5268 Malvidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain