Gene : Thecc1EG002925 T. cacao v1.1

Defline:  (1 of 1) PTHR31307//PTHR31307:SF17 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Genomic Order:  2198
Name:  ? Thecc1EG002925 Secondary Identifier:  ? PAC:27434074

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002925 0.5kb upstream 0.5kb upstream 1725 true scaffold_1: 17483685-17485409 Theobroma cacao
Thecc1EG002925 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17484910-17485409 Theobroma cacao
Thecc1EG002925 0.5kb downstream 0.5kb downstream 1725 true scaffold_1: 17483185-17484909 Theobroma cacao
Thecc1EG002925 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17483185-17483684 Theobroma cacao
Thecc1EG002925 1.0kb upstream 1.0kb upstream 2225 true scaffold_1: 17483685-17485909 Theobroma cacao
Thecc1EG002925 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17484910-17485909 Theobroma cacao
Thecc1EG002925 1.0kb downstream 1.0kb downstream 2225 true scaffold_1: 17482685-17484909 Theobroma cacao
Thecc1EG002925 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17482685-17483684 Theobroma cacao
Thecc1EG002925 2.0kb upstream 2.0kb upstream 3225 true scaffold_1: 17483685-17486909 Theobroma cacao
Thecc1EG002925 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17484910-17486909 Theobroma cacao
Thecc1EG002925 2.0kb downstream 2.0kb downstream 3225 true scaffold_1: 17481685-17484909 Theobroma cacao
Thecc1EG002925 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17481685-17483684 Theobroma cacao
Thecc1EG002925 5.0kb upstream 5.0kb upstream 6225 true scaffold_1: 17483685-17489909 Theobroma cacao
Thecc1EG002925 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17484910-17489909 Theobroma cacao
Thecc1EG002925 5.0kb downstream 5.0kb downstream 6225 true scaffold_1: 17478685-17484909 Theobroma cacao
Thecc1EG002925 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17478685-17483684 Theobroma cacao
Thecc1EG002925 10.0kb upstream 10.0kb upstream 11225 true scaffold_1: 17483685-17494909 Theobroma cacao
Thecc1EG002925 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17484910-17494909 Theobroma cacao
Thecc1EG002925 10.0kb downstream 10.0kb downstream 11225 true scaffold_1: 17473685-17484909 Theobroma cacao
Thecc1EG002925 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17473685-17483684 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835326 5264 Brassicales-Malvales View MSA
124322028 5266 SBM View MSA
124240093 5268 Malvidae View MSA
124068067 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain