Gene : Thecc1EG003876 T. cacao v1.1
Defline:  (1 of 5) PF09337 - His(2)-Cys(2) zinc finger (zf-H2C2) Genomic Order:  2466
Name:  ? Thecc1EG003876 Secondary Identifier:  ? PAC:27434649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003876 0.5kb upstream 0.5kb upstream 7831 true scaffold_1: 27518241-27526071 Theobroma cacao
Thecc1EG003876 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 27525572-27526071 Theobroma cacao
Thecc1EG003876 0.5kb downstream 0.5kb downstream 7831 true scaffold_1: 27517741-27525571 Theobroma cacao
Thecc1EG003876 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 27517741-27518240 Theobroma cacao
Thecc1EG003876 1.0kb upstream 1.0kb upstream 8331 true scaffold_1: 27518241-27526571 Theobroma cacao
Thecc1EG003876 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 27525572-27526571 Theobroma cacao
Thecc1EG003876 1.0kb downstream 1.0kb downstream 8331 true scaffold_1: 27517241-27525571 Theobroma cacao
Thecc1EG003876 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 27517241-27518240 Theobroma cacao
Thecc1EG003876 2.0kb upstream 2.0kb upstream 9331 true scaffold_1: 27518241-27527571 Theobroma cacao
Thecc1EG003876 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 27525572-27527571 Theobroma cacao
Thecc1EG003876 2.0kb downstream 2.0kb downstream 9331 true scaffold_1: 27516241-27525571 Theobroma cacao
Thecc1EG003876 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 27516241-27518240 Theobroma cacao
Thecc1EG003876 5.0kb upstream 5.0kb upstream 12331 true scaffold_1: 27518241-27530571 Theobroma cacao
Thecc1EG003876 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 27525572-27530571 Theobroma cacao
Thecc1EG003876 5.0kb downstream 5.0kb downstream 12331 true scaffold_1: 27513241-27525571 Theobroma cacao
Thecc1EG003876 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 27513241-27518240 Theobroma cacao
Thecc1EG003876 10.0kb upstream 10.0kb upstream 17331 true scaffold_1: 27518241-27535571 Theobroma cacao
Thecc1EG003876 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 27525572-27535571 Theobroma cacao
Thecc1EG003876 10.0kb downstream 10.0kb downstream 17331 true scaffold_1: 27508241-27525571 Theobroma cacao
Thecc1EG003876 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 27508241-27518240 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029300 5273 Angiosperm View MSA
123815661 5264 Brassicales-Malvales Singleton cluster - no MSA
124312086 5266 SBM Singleton cluster - no MSA
124161295 5268 Malvidae Singleton cluster - no MSA
123885271 5270 Rosid Singleton cluster - no MSA
123467834 5271 Pentapetalae Singleton cluster - no MSA
122503132 5272 Eudicot Singleton cluster - no MSA
121298648 5274 Embryophyte View MSA
123336608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain