Gene : Thecc1EG003861 T. cacao v1.1
Defline:  Unknown Genomic Order:  2460
Name:  ? Thecc1EG003861 Secondary Identifier:  ? PAC:27431386
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003861 0.5kb upstream 0.5kb upstream 1434 true scaffold_1: 27357253-27358686 Theobroma cacao
Thecc1EG003861 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 27358187-27358686 Theobroma cacao
Thecc1EG003861 0.5kb downstream 0.5kb downstream 1434 true scaffold_1: 27356753-27358186 Theobroma cacao
Thecc1EG003861 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 27356753-27357252 Theobroma cacao
Thecc1EG003861 1.0kb upstream 1.0kb upstream 1934 true scaffold_1: 27357253-27359186 Theobroma cacao
Thecc1EG003861 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 27358187-27359186 Theobroma cacao
Thecc1EG003861 1.0kb downstream 1.0kb downstream 1934 true scaffold_1: 27356253-27358186 Theobroma cacao
Thecc1EG003861 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 27356253-27357252 Theobroma cacao
Thecc1EG003861 2.0kb upstream 2.0kb upstream 2934 true scaffold_1: 27357253-27360186 Theobroma cacao
Thecc1EG003861 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 27358187-27360186 Theobroma cacao
Thecc1EG003861 2.0kb downstream 2.0kb downstream 2934 true scaffold_1: 27355253-27358186 Theobroma cacao
Thecc1EG003861 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 27355253-27357252 Theobroma cacao
Thecc1EG003861 5.0kb upstream 5.0kb upstream 5934 true scaffold_1: 27357253-27363186 Theobroma cacao
Thecc1EG003861 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 27358187-27363186 Theobroma cacao
Thecc1EG003861 5.0kb downstream 5.0kb downstream 5934 true scaffold_1: 27352253-27358186 Theobroma cacao
Thecc1EG003861 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 27352253-27357252 Theobroma cacao
Thecc1EG003861 10.0kb upstream 10.0kb upstream 10934 true scaffold_1: 27357253-27368186 Theobroma cacao
Thecc1EG003861 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 27358187-27368186 Theobroma cacao
Thecc1EG003861 10.0kb downstream 10.0kb downstream 10934 true scaffold_1: 27347253-27358186 Theobroma cacao
Thecc1EG003861 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 27347253-27357252 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816181 5264 Brassicales-Malvales Singleton cluster - no MSA
124312586 5266 SBM Singleton cluster - no MSA
124161747 5268 Malvidae Singleton cluster - no MSA
124038186 5270 Rosid View MSA
123753095 5271 Pentapetalae View MSA
122774950 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain