Gene : Thecc1EG003777 T. cacao v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF14 - GLUTAREDOXIN // GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  2434
Name:  ? Thecc1EG003777 Secondary Identifier:  ? PAC:27433834
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao THIOREDOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003777 0.5kb upstream 0.5kb upstream 5166 true scaffold_1: 26559365-26564530 Theobroma cacao
Thecc1EG003777 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 26564031-26564530 Theobroma cacao
Thecc1EG003777 0.5kb downstream 0.5kb downstream 5166 true scaffold_1: 26558865-26564030 Theobroma cacao
Thecc1EG003777 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 26558865-26559364 Theobroma cacao
Thecc1EG003777 1.0kb upstream 1.0kb upstream 5666 true scaffold_1: 26559365-26565030 Theobroma cacao
Thecc1EG003777 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 26564031-26565030 Theobroma cacao
Thecc1EG003777 1.0kb downstream 1.0kb downstream 5666 true scaffold_1: 26558365-26564030 Theobroma cacao
Thecc1EG003777 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 26558365-26559364 Theobroma cacao
Thecc1EG003777 2.0kb upstream 2.0kb upstream 6666 true scaffold_1: 26559365-26566030 Theobroma cacao
Thecc1EG003777 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 26564031-26566030 Theobroma cacao
Thecc1EG003777 2.0kb downstream 2.0kb downstream 6666 true scaffold_1: 26557365-26564030 Theobroma cacao
Thecc1EG003777 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 26557365-26559364 Theobroma cacao
Thecc1EG003777 5.0kb upstream 5.0kb upstream 9666 true scaffold_1: 26559365-26569030 Theobroma cacao
Thecc1EG003777 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 26564031-26569030 Theobroma cacao
Thecc1EG003777 5.0kb downstream 5.0kb downstream 9666 true scaffold_1: 26554365-26564030 Theobroma cacao
Thecc1EG003777 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 26554365-26559364 Theobroma cacao
Thecc1EG003777 10.0kb upstream 10.0kb upstream 14666 true scaffold_1: 26559365-26574030 Theobroma cacao
Thecc1EG003777 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 26564031-26574030 Theobroma cacao
Thecc1EG003777 10.0kb downstream 10.0kb downstream 14666 true scaffold_1: 26549365-26564030 Theobroma cacao
Thecc1EG003777 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 26549365-26559364 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
123827749 5264 Brassicales-Malvales View MSA
124341249 5266 SBM View MSA
124252514 5268 Malvidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain