Gene : Thecc1EG003771 T. cacao v1.1
Defline:  (1 of 2) K02693 - photosystem I subunit IV (psaE) Genomic Order:  2429
Name:  ? Thecc1EG003771 Secondary Identifier:  ? PAC:27437258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003771 0.5kb upstream 0.5kb upstream 1523 true scaffold_1: 26550796-26552318 Theobroma cacao
Thecc1EG003771 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 26550796-26551295 Theobroma cacao
Thecc1EG003771 0.5kb downstream 0.5kb downstream 1523 true scaffold_1: 26551296-26552818 Theobroma cacao
Thecc1EG003771 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 26552319-26552818 Theobroma cacao
Thecc1EG003771 1.0kb upstream 1.0kb upstream 2023 true scaffold_1: 26550296-26552318 Theobroma cacao
Thecc1EG003771 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 26550296-26551295 Theobroma cacao
Thecc1EG003771 1.0kb downstream 1.0kb downstream 2023 true scaffold_1: 26551296-26553318 Theobroma cacao
Thecc1EG003771 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 26552319-26553318 Theobroma cacao
Thecc1EG003771 2.0kb upstream 2.0kb upstream 3023 true scaffold_1: 26549296-26552318 Theobroma cacao
Thecc1EG003771 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 26549296-26551295 Theobroma cacao
Thecc1EG003771 2.0kb downstream 2.0kb downstream 3023 true scaffold_1: 26551296-26554318 Theobroma cacao
Thecc1EG003771 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 26552319-26554318 Theobroma cacao
Thecc1EG003771 5.0kb upstream 5.0kb upstream 6023 true scaffold_1: 26546296-26552318 Theobroma cacao
Thecc1EG003771 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 26546296-26551295 Theobroma cacao
Thecc1EG003771 5.0kb downstream 5.0kb downstream 6023 true scaffold_1: 26551296-26557318 Theobroma cacao
Thecc1EG003771 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 26552319-26557318 Theobroma cacao
Thecc1EG003771 10.0kb upstream 10.0kb upstream 11023 true scaffold_1: 26541296-26552318 Theobroma cacao
Thecc1EG003771 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 26541296-26551295 Theobroma cacao
Thecc1EG003771 10.0kb downstream 10.0kb downstream 11023 true scaffold_1: 26551296-26562318 Theobroma cacao
Thecc1EG003771 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 26552319-26562318 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840896 5264 Brassicales-Malvales View MSA
124339470 5266 SBM View MSA
124244630 5268 Malvidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain