Gene : Thecc1EG003734 T. cacao v1.1

Defline:  (1 of 1) PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Genomic Order:  2415
Name:  ? Thecc1EG003734 Secondary Identifier:  ? PAC:27434901

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003734 0.5kb upstream 0.5kb upstream 7257 true scaffold_1: 26147439-26154695 Theobroma cacao
Thecc1EG003734 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 26154196-26154695 Theobroma cacao
Thecc1EG003734 0.5kb downstream 0.5kb downstream 7257 true scaffold_1: 26146939-26154195 Theobroma cacao
Thecc1EG003734 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 26146939-26147438 Theobroma cacao
Thecc1EG003734 1.0kb upstream 1.0kb upstream 7757 true scaffold_1: 26147439-26155195 Theobroma cacao
Thecc1EG003734 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 26154196-26155195 Theobroma cacao
Thecc1EG003734 1.0kb downstream 1.0kb downstream 7757 true scaffold_1: 26146439-26154195 Theobroma cacao
Thecc1EG003734 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 26146439-26147438 Theobroma cacao
Thecc1EG003734 2.0kb upstream 2.0kb upstream 8757 true scaffold_1: 26147439-26156195 Theobroma cacao
Thecc1EG003734 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 26154196-26156195 Theobroma cacao
Thecc1EG003734 2.0kb downstream 2.0kb downstream 8757 true scaffold_1: 26145439-26154195 Theobroma cacao
Thecc1EG003734 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 26145439-26147438 Theobroma cacao
Thecc1EG003734 5.0kb upstream 5.0kb upstream 11757 true scaffold_1: 26147439-26159195 Theobroma cacao
Thecc1EG003734 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 26154196-26159195 Theobroma cacao
Thecc1EG003734 5.0kb downstream 5.0kb downstream 11757 true scaffold_1: 26142439-26154195 Theobroma cacao
Thecc1EG003734 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 26142439-26147438 Theobroma cacao
Thecc1EG003734 10.0kb upstream 10.0kb upstream 16757 true scaffold_1: 26147439-26164195 Theobroma cacao
Thecc1EG003734 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 26154196-26164195 Theobroma cacao
Thecc1EG003734 10.0kb downstream 10.0kb downstream 16757 true scaffold_1: 26137439-26154195 Theobroma cacao
Thecc1EG003734 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 26137439-26147438 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833870 5264 Brassicales-Malvales View MSA
124339562 5266 SBM View MSA
124239692 5268 Malvidae View MSA
124062840 5270 Rosid View MSA
123739280 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain