Gene : Thecc1EG003334 T. cacao v1.1
Defline:  (1 of 1) PTHR11108//PTHR11108:SF5 - FERROCHELATASE // FERROCHELATASE-2, CHLOROPLASTIC Genomic Order:  2334
Name:  ? Thecc1EG003334 Secondary Identifier:  ? PAC:27434575
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao HEME-BIOSYNTHESIS-II Theobroma cacao pathologic  
Tcacao PWY-5918 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003334 0.5kb upstream 0.5kb upstream 20836 true scaffold_1: 22018840-22039675 Theobroma cacao
Thecc1EG003334 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 22039176-22039675 Theobroma cacao
Thecc1EG003334 0.5kb downstream 0.5kb downstream 20836 true scaffold_1: 22018340-22039175 Theobroma cacao
Thecc1EG003334 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 22018340-22018839 Theobroma cacao
Thecc1EG003334 1.0kb upstream 1.0kb upstream 21336 true scaffold_1: 22018840-22040175 Theobroma cacao
Thecc1EG003334 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 22039176-22040175 Theobroma cacao
Thecc1EG003334 1.0kb downstream 1.0kb downstream 21336 true scaffold_1: 22017840-22039175 Theobroma cacao
Thecc1EG003334 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 22017840-22018839 Theobroma cacao
Thecc1EG003334 2.0kb upstream 2.0kb upstream 22336 true scaffold_1: 22018840-22041175 Theobroma cacao
Thecc1EG003334 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 22039176-22041175 Theobroma cacao
Thecc1EG003334 2.0kb downstream 2.0kb downstream 22336 true scaffold_1: 22016840-22039175 Theobroma cacao
Thecc1EG003334 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 22016840-22018839 Theobroma cacao
Thecc1EG003334 5.0kb upstream 5.0kb upstream 25336 true scaffold_1: 22018840-22044175 Theobroma cacao
Thecc1EG003334 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 22039176-22044175 Theobroma cacao
Thecc1EG003334 5.0kb downstream 5.0kb downstream 25336 true scaffold_1: 22013840-22039175 Theobroma cacao
Thecc1EG003334 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 22013840-22018839 Theobroma cacao
Thecc1EG003334 10.0kb upstream 10.0kb upstream 30336 true scaffold_1: 22018840-22049175 Theobroma cacao
Thecc1EG003334 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 22039176-22049175 Theobroma cacao
Thecc1EG003334 10.0kb downstream 10.0kb downstream 30336 true scaffold_1: 22008840-22039175 Theobroma cacao
Thecc1EG003334 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 22008840-22018839 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834535 5264 Brassicales-Malvales View MSA
124342500 5266 SBM View MSA
124240498 5268 Malvidae View MSA
124065321 5270 Rosid View MSA
123739470 5271 Pentapetalae View MSA
122791512 5272 Eudicot View MSA
122044162 5273 Angiosperm View MSA
121346360 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain