Gene : Thecc1EG004037 T. cacao v1.1
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  2564
Name:  ? Thecc1EG004037 Secondary Identifier:  ? PAC:27431884
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004037 0.5kb upstream 0.5kb upstream 1634 true scaffold_1: 28766174-28767807 Theobroma cacao
Thecc1EG004037 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 28766174-28766673 Theobroma cacao
Thecc1EG004037 0.5kb downstream 0.5kb downstream 1634 true scaffold_1: 28766674-28768307 Theobroma cacao
Thecc1EG004037 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 28767808-28768307 Theobroma cacao
Thecc1EG004037 1.0kb upstream 1.0kb upstream 2134 true scaffold_1: 28765674-28767807 Theobroma cacao
Thecc1EG004037 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 28765674-28766673 Theobroma cacao
Thecc1EG004037 1.0kb downstream 1.0kb downstream 2134 true scaffold_1: 28766674-28768807 Theobroma cacao
Thecc1EG004037 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 28767808-28768807 Theobroma cacao
Thecc1EG004037 2.0kb upstream 2.0kb upstream 3134 true scaffold_1: 28764674-28767807 Theobroma cacao
Thecc1EG004037 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 28764674-28766673 Theobroma cacao
Thecc1EG004037 2.0kb downstream 2.0kb downstream 3134 true scaffold_1: 28766674-28769807 Theobroma cacao
Thecc1EG004037 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 28767808-28769807 Theobroma cacao
Thecc1EG004037 5.0kb upstream 5.0kb upstream 6134 true scaffold_1: 28761674-28767807 Theobroma cacao
Thecc1EG004037 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 28761674-28766673 Theobroma cacao
Thecc1EG004037 5.0kb downstream 5.0kb downstream 6134 true scaffold_1: 28766674-28772807 Theobroma cacao
Thecc1EG004037 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 28767808-28772807 Theobroma cacao
Thecc1EG004037 10.0kb upstream 10.0kb upstream 11134 true scaffold_1: 28756674-28767807 Theobroma cacao
Thecc1EG004037 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 28756674-28766673 Theobroma cacao
Thecc1EG004037 10.0kb downstream 10.0kb downstream 11134 true scaffold_1: 28766674-28777807 Theobroma cacao
Thecc1EG004037 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 28767808-28777807 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824559 5264 Brassicales-Malvales View MSA
124348995 5266 SBM View MSA
124245681 5268 Malvidae View MSA
124070799 5270 Rosid View MSA
123747839 5271 Pentapetalae View MSA
122792637 5272 Eudicot View MSA
122050449 5273 Angiosperm View MSA
121311915 5274 Embryophyte View MSA
123349144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain