Gene : Thecc1EG004020 T. cacao v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF119 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  2551
Name:  ? Thecc1EG004020 Secondary Identifier:  ? PAC:27435378
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004020 0.5kb upstream 0.5kb upstream 7600 true scaffold_1: 28664642-28672241 Theobroma cacao
Thecc1EG004020 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 28671742-28672241 Theobroma cacao
Thecc1EG004020 0.5kb downstream 0.5kb downstream 7600 true scaffold_1: 28664142-28671741 Theobroma cacao
Thecc1EG004020 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 28664142-28664641 Theobroma cacao
Thecc1EG004020 1.0kb upstream 1.0kb upstream 8100 true scaffold_1: 28664642-28672741 Theobroma cacao
Thecc1EG004020 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 28671742-28672741 Theobroma cacao
Thecc1EG004020 1.0kb downstream 1.0kb downstream 8100 true scaffold_1: 28663642-28671741 Theobroma cacao
Thecc1EG004020 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 28663642-28664641 Theobroma cacao
Thecc1EG004020 2.0kb upstream 2.0kb upstream 9100 true scaffold_1: 28664642-28673741 Theobroma cacao
Thecc1EG004020 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 28671742-28673741 Theobroma cacao
Thecc1EG004020 2.0kb downstream 2.0kb downstream 9100 true scaffold_1: 28662642-28671741 Theobroma cacao
Thecc1EG004020 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 28662642-28664641 Theobroma cacao
Thecc1EG004020 5.0kb upstream 5.0kb upstream 12100 true scaffold_1: 28664642-28676741 Theobroma cacao
Thecc1EG004020 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 28671742-28676741 Theobroma cacao
Thecc1EG004020 5.0kb downstream 5.0kb downstream 12100 true scaffold_1: 28659642-28671741 Theobroma cacao
Thecc1EG004020 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 28659642-28664641 Theobroma cacao
Thecc1EG004020 10.0kb upstream 10.0kb upstream 17100 true scaffold_1: 28664642-28681741 Theobroma cacao
Thecc1EG004020 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 28671742-28681741 Theobroma cacao
Thecc1EG004020 10.0kb downstream 10.0kb downstream 17100 true scaffold_1: 28654642-28671741 Theobroma cacao
Thecc1EG004020 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 28654642-28664641 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829079 5264 Brassicales-Malvales View MSA
124344336 5266 SBM View MSA
124243678 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain