Gene : Thecc1EG004015 T. cacao v1.1
Defline:  (1 of 9) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  2550
Name:  ? Thecc1EG004015 Secondary Identifier:  ? PAC:27437482
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004015 0.5kb upstream 0.5kb upstream 12839 true scaffold_1: 28597787-28610625 Theobroma cacao
Thecc1EG004015 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 28610126-28610625 Theobroma cacao
Thecc1EG004015 0.5kb downstream 0.5kb downstream 12839 true scaffold_1: 28597287-28610125 Theobroma cacao
Thecc1EG004015 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 28597287-28597786 Theobroma cacao
Thecc1EG004015 1.0kb upstream 1.0kb upstream 13339 true scaffold_1: 28597787-28611125 Theobroma cacao
Thecc1EG004015 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 28610126-28611125 Theobroma cacao
Thecc1EG004015 1.0kb downstream 1.0kb downstream 13339 true scaffold_1: 28596787-28610125 Theobroma cacao
Thecc1EG004015 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 28596787-28597786 Theobroma cacao
Thecc1EG004015 2.0kb upstream 2.0kb upstream 14339 true scaffold_1: 28597787-28612125 Theobroma cacao
Thecc1EG004015 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 28610126-28612125 Theobroma cacao
Thecc1EG004015 2.0kb downstream 2.0kb downstream 14339 true scaffold_1: 28595787-28610125 Theobroma cacao
Thecc1EG004015 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 28595787-28597786 Theobroma cacao
Thecc1EG004015 5.0kb upstream 5.0kb upstream 17339 true scaffold_1: 28597787-28615125 Theobroma cacao
Thecc1EG004015 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 28610126-28615125 Theobroma cacao
Thecc1EG004015 5.0kb downstream 5.0kb downstream 17339 true scaffold_1: 28592787-28610125 Theobroma cacao
Thecc1EG004015 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 28592787-28597786 Theobroma cacao
Thecc1EG004015 10.0kb upstream 10.0kb upstream 22339 true scaffold_1: 28597787-28620125 Theobroma cacao
Thecc1EG004015 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 28610126-28620125 Theobroma cacao
Thecc1EG004015 10.0kb downstream 10.0kb downstream 22339 true scaffold_1: 28587787-28610125 Theobroma cacao
Thecc1EG004015 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 28587787-28597786 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829721 5264 Brassicales-Malvales View MSA
124351624 5266 SBM View MSA
124253434 5268 Malvidae View MSA
124071658 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain