Gene : Thecc1EG003909 T. cacao v1.1

Defline:  (1 of 2) PTHR10693//PTHR10693:SF29 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // GB|AAD20086.1 Genomic Order:  2488
Name:  ? Thecc1EG003909 Secondary Identifier:  ? PAC:27434781

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003909 0.5kb upstream 0.5kb upstream 6135 true scaffold_1: 27785914-27792048 Theobroma cacao
Thecc1EG003909 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 27791549-27792048 Theobroma cacao
Thecc1EG003909 0.5kb downstream 0.5kb downstream 6135 true scaffold_1: 27785414-27791548 Theobroma cacao
Thecc1EG003909 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 27785414-27785913 Theobroma cacao
Thecc1EG003909 1.0kb upstream 1.0kb upstream 6635 true scaffold_1: 27785914-27792548 Theobroma cacao
Thecc1EG003909 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 27791549-27792548 Theobroma cacao
Thecc1EG003909 1.0kb downstream 1.0kb downstream 6635 true scaffold_1: 27784914-27791548 Theobroma cacao
Thecc1EG003909 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 27784914-27785913 Theobroma cacao
Thecc1EG003909 2.0kb upstream 2.0kb upstream 7635 true scaffold_1: 27785914-27793548 Theobroma cacao
Thecc1EG003909 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 27791549-27793548 Theobroma cacao
Thecc1EG003909 2.0kb downstream 2.0kb downstream 7635 true scaffold_1: 27783914-27791548 Theobroma cacao
Thecc1EG003909 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 27783914-27785913 Theobroma cacao
Thecc1EG003909 5.0kb upstream 5.0kb upstream 10635 true scaffold_1: 27785914-27796548 Theobroma cacao
Thecc1EG003909 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 27791549-27796548 Theobroma cacao
Thecc1EG003909 5.0kb downstream 5.0kb downstream 10635 true scaffold_1: 27780914-27791548 Theobroma cacao
Thecc1EG003909 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 27780914-27785913 Theobroma cacao
Thecc1EG003909 10.0kb upstream 10.0kb upstream 15635 true scaffold_1: 27785914-27801548 Theobroma cacao
Thecc1EG003909 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 27791549-27801548 Theobroma cacao
Thecc1EG003909 10.0kb downstream 10.0kb downstream 15635 true scaffold_1: 27775914-27791548 Theobroma cacao
Thecc1EG003909 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 27775914-27785913 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833037 5264 Brassicales-Malvales View MSA
124346315 5266 SBM View MSA
124243386 5268 Malvidae View MSA
124070794 5270 Rosid View MSA
123747329 5271 Pentapetalae View MSA
122793510 5272 Eudicot View MSA
122050704 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain