Gene : Thecc1EG003892 T. cacao v1.1

Defline:  (1 of 1) PTHR24223:SF189 - ABC TRANSPORTER C FAMILY MEMBER 5 Genomic Order:  2473
Name:  ? Thecc1EG003892 Secondary Identifier:  ? PAC:27434340

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG003892 0.5kb upstream 0.5kb upstream 11757 true scaffold_1: 27664063-27675819 Theobroma cacao
Thecc1EG003892 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 27664063-27664562 Theobroma cacao
Thecc1EG003892 0.5kb downstream 0.5kb downstream 11757 true scaffold_1: 27664563-27676319 Theobroma cacao
Thecc1EG003892 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 27675820-27676319 Theobroma cacao
Thecc1EG003892 1.0kb upstream 1.0kb upstream 12257 true scaffold_1: 27663563-27675819 Theobroma cacao
Thecc1EG003892 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 27663563-27664562 Theobroma cacao
Thecc1EG003892 1.0kb downstream 1.0kb downstream 12257 true scaffold_1: 27664563-27676819 Theobroma cacao
Thecc1EG003892 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 27675820-27676819 Theobroma cacao
Thecc1EG003892 2.0kb upstream 2.0kb upstream 13257 true scaffold_1: 27662563-27675819 Theobroma cacao
Thecc1EG003892 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 27662563-27664562 Theobroma cacao
Thecc1EG003892 2.0kb downstream 2.0kb downstream 13257 true scaffold_1: 27664563-27677819 Theobroma cacao
Thecc1EG003892 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 27675820-27677819 Theobroma cacao
Thecc1EG003892 5.0kb upstream 5.0kb upstream 16257 true scaffold_1: 27659563-27675819 Theobroma cacao
Thecc1EG003892 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 27659563-27664562 Theobroma cacao
Thecc1EG003892 5.0kb downstream 5.0kb downstream 16257 true scaffold_1: 27664563-27680819 Theobroma cacao
Thecc1EG003892 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 27675820-27680819 Theobroma cacao
Thecc1EG003892 10.0kb upstream 10.0kb upstream 21257 true scaffold_1: 27654563-27675819 Theobroma cacao
Thecc1EG003892 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 27654563-27664562 Theobroma cacao
Thecc1EG003892 10.0kb downstream 10.0kb downstream 21257 true scaffold_1: 27664563-27685819 Theobroma cacao
Thecc1EG003892 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 27675820-27685819 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831011 5264 Brassicales-Malvales View MSA
124336527 5266 SBM View MSA
124249807 5268 Malvidae View MSA
124062318 5270 Rosid View MSA
123738711 5271 Pentapetalae View MSA
122797524 5272 Eudicot View MSA
122042254 5273 Angiosperm View MSA
121346064 5274 Embryophyte View MSA
123380316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain