Gene : Thecc1EG004181 T. cacao v1.1
Defline:  (1 of 2) PTHR11467:SF48 - HISTONE H1.1-RELATED Genomic Order:  2636
Name:  ? Thecc1EG004181 Secondary Identifier:  ? PAC:27431881
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004181 0.5kb upstream 0.5kb upstream 1855 true scaffold_1: 30059462-30061316 Theobroma cacao
Thecc1EG004181 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 30060817-30061316 Theobroma cacao
Thecc1EG004181 0.5kb downstream 0.5kb downstream 1855 true scaffold_1: 30058962-30060816 Theobroma cacao
Thecc1EG004181 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 30058962-30059461 Theobroma cacao
Thecc1EG004181 1.0kb upstream 1.0kb upstream 2355 true scaffold_1: 30059462-30061816 Theobroma cacao
Thecc1EG004181 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 30060817-30061816 Theobroma cacao
Thecc1EG004181 1.0kb downstream 1.0kb downstream 2355 true scaffold_1: 30058462-30060816 Theobroma cacao
Thecc1EG004181 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 30058462-30059461 Theobroma cacao
Thecc1EG004181 2.0kb upstream 2.0kb upstream 3355 true scaffold_1: 30059462-30062816 Theobroma cacao
Thecc1EG004181 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 30060817-30062816 Theobroma cacao
Thecc1EG004181 2.0kb downstream 2.0kb downstream 3355 true scaffold_1: 30057462-30060816 Theobroma cacao
Thecc1EG004181 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 30057462-30059461 Theobroma cacao
Thecc1EG004181 5.0kb upstream 5.0kb upstream 6355 true scaffold_1: 30059462-30065816 Theobroma cacao
Thecc1EG004181 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 30060817-30065816 Theobroma cacao
Thecc1EG004181 5.0kb downstream 5.0kb downstream 6355 true scaffold_1: 30054462-30060816 Theobroma cacao
Thecc1EG004181 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 30054462-30059461 Theobroma cacao
Thecc1EG004181 10.0kb upstream 10.0kb upstream 11355 true scaffold_1: 30059462-30070816 Theobroma cacao
Thecc1EG004181 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 30060817-30070816 Theobroma cacao
Thecc1EG004181 10.0kb downstream 10.0kb downstream 11355 true scaffold_1: 30049462-30060816 Theobroma cacao
Thecc1EG004181 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 30049462-30059461 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837224 5264 Brassicales-Malvales View MSA
124350308 5266 SBM View MSA
124250216 5268 Malvidae View MSA
124071858 5270 Rosid View MSA
123748921 5271 Pentapetalae View MSA
122797183 5272 Eudicot View MSA
122049683 5273 Angiosperm View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain