Gene : Thecc1EG004434 T. cacao v1.1
Defline:  (1 of 2) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  2813
Name:  ? Thecc1EG004434 Secondary Identifier:  ? PAC:27437029
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2681 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004434 0.5kb upstream 0.5kb upstream 2225 true scaffold_1: 31581787-31584011 Theobroma cacao
Thecc1EG004434 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31581787-31582286 Theobroma cacao
Thecc1EG004434 0.5kb downstream 0.5kb downstream 2225 true scaffold_1: 31582287-31584511 Theobroma cacao
Thecc1EG004434 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31584012-31584511 Theobroma cacao
Thecc1EG004434 1.0kb upstream 1.0kb upstream 2725 true scaffold_1: 31581287-31584011 Theobroma cacao
Thecc1EG004434 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31581287-31582286 Theobroma cacao
Thecc1EG004434 1.0kb downstream 1.0kb downstream 2725 true scaffold_1: 31582287-31585011 Theobroma cacao
Thecc1EG004434 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31584012-31585011 Theobroma cacao
Thecc1EG004434 2.0kb upstream 2.0kb upstream 3725 true scaffold_1: 31580287-31584011 Theobroma cacao
Thecc1EG004434 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31580287-31582286 Theobroma cacao
Thecc1EG004434 2.0kb downstream 2.0kb downstream 3725 true scaffold_1: 31582287-31586011 Theobroma cacao
Thecc1EG004434 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31584012-31586011 Theobroma cacao
Thecc1EG004434 5.0kb upstream 5.0kb upstream 6725 true scaffold_1: 31577287-31584011 Theobroma cacao
Thecc1EG004434 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31577287-31582286 Theobroma cacao
Thecc1EG004434 5.0kb downstream 5.0kb downstream 6725 true scaffold_1: 31582287-31589011 Theobroma cacao
Thecc1EG004434 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31584012-31589011 Theobroma cacao
Thecc1EG004434 10.0kb upstream 10.0kb upstream 11725 true scaffold_1: 31572287-31584011 Theobroma cacao
Thecc1EG004434 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31572287-31582286 Theobroma cacao
Thecc1EG004434 10.0kb downstream 10.0kb downstream 11725 true scaffold_1: 31582287-31594011 Theobroma cacao
Thecc1EG004434 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31584012-31594011 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836221 5264 Brassicales-Malvales View MSA
124350163 5266 SBM View MSA
124241505 5268 Malvidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain