Gene : Thecc1EG004411 T. cacao v1.1
Defline:  (1 of 2) PTHR32285:SF65 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 10-RELATED Genomic Order:  2797
Name:  ? Thecc1EG004411 Secondary Identifier:  ? PAC:27435072
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004411 0.5kb upstream 0.5kb upstream 8915 true scaffold_1: 31463860-31472774 Theobroma cacao
Thecc1EG004411 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31472275-31472774 Theobroma cacao
Thecc1EG004411 0.5kb downstream 0.5kb downstream 8915 true scaffold_1: 31463360-31472274 Theobroma cacao
Thecc1EG004411 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31463360-31463859 Theobroma cacao
Thecc1EG004411 1.0kb upstream 1.0kb upstream 9415 true scaffold_1: 31463860-31473274 Theobroma cacao
Thecc1EG004411 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31472275-31473274 Theobroma cacao
Thecc1EG004411 1.0kb downstream 1.0kb downstream 9415 true scaffold_1: 31462860-31472274 Theobroma cacao
Thecc1EG004411 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31462860-31463859 Theobroma cacao
Thecc1EG004411 2.0kb upstream 2.0kb upstream 10415 true scaffold_1: 31463860-31474274 Theobroma cacao
Thecc1EG004411 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31472275-31474274 Theobroma cacao
Thecc1EG004411 2.0kb downstream 2.0kb downstream 10415 true scaffold_1: 31461860-31472274 Theobroma cacao
Thecc1EG004411 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31461860-31463859 Theobroma cacao
Thecc1EG004411 5.0kb upstream 5.0kb upstream 13415 true scaffold_1: 31463860-31477274 Theobroma cacao
Thecc1EG004411 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31472275-31477274 Theobroma cacao
Thecc1EG004411 5.0kb downstream 5.0kb downstream 13415 true scaffold_1: 31458860-31472274 Theobroma cacao
Thecc1EG004411 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31458860-31463859 Theobroma cacao
Thecc1EG004411 10.0kb upstream 10.0kb upstream 18415 true scaffold_1: 31463860-31482274 Theobroma cacao
Thecc1EG004411 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31472275-31482274 Theobroma cacao
Thecc1EG004411 10.0kb downstream 10.0kb downstream 18415 true scaffold_1: 31453860-31472274 Theobroma cacao
Thecc1EG004411 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31453860-31463859 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815587 5264 Brassicales-Malvales Singleton cluster - no MSA
124312017 5266 SBM Singleton cluster - no MSA
124161232 5268 Malvidae Singleton cluster - no MSA
124074209 5270 Rosid View MSA
123751556 5271 Pentapetalae View MSA
122785913 5272 Eudicot View MSA
122043829 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121345496 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain