Gene : Thecc1EG004398 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2788
Name:  ? Thecc1EG004398 Secondary Identifier:  ? PAC:27435884
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004398 0.5kb upstream 0.5kb upstream 3254 true scaffold_1: 31386379-31389632 Theobroma cacao
Thecc1EG004398 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31386379-31386878 Theobroma cacao
Thecc1EG004398 0.5kb downstream 0.5kb downstream 3254 true scaffold_1: 31386879-31390132 Theobroma cacao
Thecc1EG004398 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31389633-31390132 Theobroma cacao
Thecc1EG004398 1.0kb upstream 1.0kb upstream 3754 true scaffold_1: 31385879-31389632 Theobroma cacao
Thecc1EG004398 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31385879-31386878 Theobroma cacao
Thecc1EG004398 1.0kb downstream 1.0kb downstream 3754 true scaffold_1: 31386879-31390632 Theobroma cacao
Thecc1EG004398 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31389633-31390632 Theobroma cacao
Thecc1EG004398 2.0kb upstream 2.0kb upstream 4754 true scaffold_1: 31384879-31389632 Theobroma cacao
Thecc1EG004398 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31384879-31386878 Theobroma cacao
Thecc1EG004398 2.0kb downstream 2.0kb downstream 4754 true scaffold_1: 31386879-31391632 Theobroma cacao
Thecc1EG004398 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31389633-31391632 Theobroma cacao
Thecc1EG004398 5.0kb upstream 5.0kb upstream 7754 true scaffold_1: 31381879-31389632 Theobroma cacao
Thecc1EG004398 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31381879-31386878 Theobroma cacao
Thecc1EG004398 5.0kb downstream 5.0kb downstream 7754 true scaffold_1: 31386879-31394632 Theobroma cacao
Thecc1EG004398 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31389633-31394632 Theobroma cacao
Thecc1EG004398 10.0kb upstream 10.0kb upstream 12754 true scaffold_1: 31376879-31389632 Theobroma cacao
Thecc1EG004398 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31376879-31386878 Theobroma cacao
Thecc1EG004398 10.0kb downstream 10.0kb downstream 12754 true scaffold_1: 31386879-31399632 Theobroma cacao
Thecc1EG004398 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31389633-31399632 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833927 5264 Brassicales-Malvales View MSA
124339423 5266 SBM View MSA
124241200 5268 Malvidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain