Gene : Thecc1EG004390 T. cacao v1.1
Defline:  (1 of 1) PTHR11649//PTHR11649:SF36 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // FZL Genomic Order:  2784
Name:  ? Thecc1EG004390 Secondary Identifier:  ? PAC:27435087
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6908 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004390 0.5kb upstream 0.5kb upstream 12902 true scaffold_1: 31335866-31348767 Theobroma cacao
Thecc1EG004390 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31335866-31336365 Theobroma cacao
Thecc1EG004390 0.5kb downstream 0.5kb downstream 12902 true scaffold_1: 31336366-31349267 Theobroma cacao
Thecc1EG004390 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31348768-31349267 Theobroma cacao
Thecc1EG004390 1.0kb upstream 1.0kb upstream 13402 true scaffold_1: 31335366-31348767 Theobroma cacao
Thecc1EG004390 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31335366-31336365 Theobroma cacao
Thecc1EG004390 1.0kb downstream 1.0kb downstream 13402 true scaffold_1: 31336366-31349767 Theobroma cacao
Thecc1EG004390 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31348768-31349767 Theobroma cacao
Thecc1EG004390 2.0kb upstream 2.0kb upstream 14402 true scaffold_1: 31334366-31348767 Theobroma cacao
Thecc1EG004390 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31334366-31336365 Theobroma cacao
Thecc1EG004390 2.0kb downstream 2.0kb downstream 14402 true scaffold_1: 31336366-31350767 Theobroma cacao
Thecc1EG004390 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31348768-31350767 Theobroma cacao
Thecc1EG004390 5.0kb upstream 5.0kb upstream 17402 true scaffold_1: 31331366-31348767 Theobroma cacao
Thecc1EG004390 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31331366-31336365 Theobroma cacao
Thecc1EG004390 5.0kb downstream 5.0kb downstream 17402 true scaffold_1: 31336366-31353767 Theobroma cacao
Thecc1EG004390 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31348768-31353767 Theobroma cacao
Thecc1EG004390 10.0kb upstream 10.0kb upstream 22402 true scaffold_1: 31326366-31348767 Theobroma cacao
Thecc1EG004390 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31326366-31336365 Theobroma cacao
Thecc1EG004390 10.0kb downstream 10.0kb downstream 22402 true scaffold_1: 31336366-31358767 Theobroma cacao
Thecc1EG004390 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31348768-31358767 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830455 5264 Brassicales-Malvales View MSA
124338598 5266 SBM View MSA
124241140 5268 Malvidae View MSA
124060722 5270 Rosid View MSA
123736814 5271 Pentapetalae View MSA
122793541 5272 Eudicot View MSA
122045982 5273 Angiosperm View MSA
121350085 5274 Embryophyte View MSA
123425981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain