Gene : Thecc1EG004343 T. cacao v1.1
Defline:  (1 of 1) PTHR13087 - NF-KAPPA B ACTIVATING PROTEIN Genomic Order:  2750
Name:  ? Thecc1EG004343 Secondary Identifier:  ? PAC:27431686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004343 0.5kb upstream 0.5kb upstream 4234 true scaffold_1: 31088768-31093001 Theobroma cacao
Thecc1EG004343 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31088768-31089267 Theobroma cacao
Thecc1EG004343 0.5kb downstream 0.5kb downstream 4234 true scaffold_1: 31089268-31093501 Theobroma cacao
Thecc1EG004343 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31093002-31093501 Theobroma cacao
Thecc1EG004343 1.0kb upstream 1.0kb upstream 4734 true scaffold_1: 31088268-31093001 Theobroma cacao
Thecc1EG004343 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31088268-31089267 Theobroma cacao
Thecc1EG004343 1.0kb downstream 1.0kb downstream 4734 true scaffold_1: 31089268-31094001 Theobroma cacao
Thecc1EG004343 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31093002-31094001 Theobroma cacao
Thecc1EG004343 2.0kb upstream 2.0kb upstream 5734 true scaffold_1: 31087268-31093001 Theobroma cacao
Thecc1EG004343 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31087268-31089267 Theobroma cacao
Thecc1EG004343 2.0kb downstream 2.0kb downstream 5734 true scaffold_1: 31089268-31095001 Theobroma cacao
Thecc1EG004343 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31093002-31095001 Theobroma cacao
Thecc1EG004343 5.0kb upstream 5.0kb upstream 8734 true scaffold_1: 31084268-31093001 Theobroma cacao
Thecc1EG004343 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31084268-31089267 Theobroma cacao
Thecc1EG004343 5.0kb downstream 5.0kb downstream 8734 true scaffold_1: 31089268-31098001 Theobroma cacao
Thecc1EG004343 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31093002-31098001 Theobroma cacao
Thecc1EG004343 10.0kb upstream 10.0kb upstream 13734 true scaffold_1: 31079268-31093001 Theobroma cacao
Thecc1EG004343 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31079268-31089267 Theobroma cacao
Thecc1EG004343 10.0kb downstream 10.0kb downstream 13734 true scaffold_1: 31089268-31103001 Theobroma cacao
Thecc1EG004343 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31093002-31103001 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828390 5264 Brassicales-Malvales View MSA
124345990 5266 SBM View MSA
124251042 5268 Malvidae View MSA
124063299 5270 Rosid View MSA
123739958 5271 Pentapetalae View MSA
122786035 5272 Eudicot View MSA
122046016 5273 Angiosperm View MSA
121348345 5274 Embryophyte View MSA
123426799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain