Gene : Thecc1EG004300 T. cacao v1.1
Defline:  (1 of 1) K01968 - 3-methylcrotonyl-CoA carboxylase alpha subunit (E6.4.1.4A) Genomic Order:  2716
Name:  ? Thecc1EG004300 Secondary Identifier:  ? PAC:27431390
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LEU-DEG2-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004300 0.5kb upstream 0.5kb upstream 8275 true scaffold_1: 30860633-30868907 Theobroma cacao
Thecc1EG004300 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 30860633-30861132 Theobroma cacao
Thecc1EG004300 0.5kb downstream 0.5kb downstream 8275 true scaffold_1: 30861133-30869407 Theobroma cacao
Thecc1EG004300 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 30868908-30869407 Theobroma cacao
Thecc1EG004300 1.0kb upstream 1.0kb upstream 8775 true scaffold_1: 30860133-30868907 Theobroma cacao
Thecc1EG004300 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 30860133-30861132 Theobroma cacao
Thecc1EG004300 1.0kb downstream 1.0kb downstream 8775 true scaffold_1: 30861133-30869907 Theobroma cacao
Thecc1EG004300 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 30868908-30869907 Theobroma cacao
Thecc1EG004300 2.0kb upstream 2.0kb upstream 9775 true scaffold_1: 30859133-30868907 Theobroma cacao
Thecc1EG004300 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 30859133-30861132 Theobroma cacao
Thecc1EG004300 2.0kb downstream 2.0kb downstream 9775 true scaffold_1: 30861133-30870907 Theobroma cacao
Thecc1EG004300 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 30868908-30870907 Theobroma cacao
Thecc1EG004300 5.0kb upstream 5.0kb upstream 12775 true scaffold_1: 30856133-30868907 Theobroma cacao
Thecc1EG004300 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 30856133-30861132 Theobroma cacao
Thecc1EG004300 5.0kb downstream 5.0kb downstream 12775 true scaffold_1: 30861133-30873907 Theobroma cacao
Thecc1EG004300 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 30868908-30873907 Theobroma cacao
Thecc1EG004300 10.0kb upstream 10.0kb upstream 17775 true scaffold_1: 30851133-30868907 Theobroma cacao
Thecc1EG004300 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 30851133-30861132 Theobroma cacao
Thecc1EG004300 10.0kb downstream 10.0kb downstream 17775 true scaffold_1: 30861133-30878907 Theobroma cacao
Thecc1EG004300 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 30868908-30878907 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827845 5264 Brassicales-Malvales View MSA
124337820 5266 SBM View MSA
124239007 5268 Malvidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain