Gene : Thecc1EG004623 T. cacao v1.1
Defline:  (1 of 3) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Xyl a1-6 Glc (XXT) Genomic Order:  2959
Name:  ? Thecc1EG004623 Secondary Identifier:  ? PAC:27432729
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5936 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004623 0.5kb upstream 0.5kb upstream 3607 true scaffold_1: 32669936-32673542 Theobroma cacao
Thecc1EG004623 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32673043-32673542 Theobroma cacao
Thecc1EG004623 0.5kb downstream 0.5kb downstream 3607 true scaffold_1: 32669436-32673042 Theobroma cacao
Thecc1EG004623 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32669436-32669935 Theobroma cacao
Thecc1EG004623 1.0kb upstream 1.0kb upstream 4107 true scaffold_1: 32669936-32674042 Theobroma cacao
Thecc1EG004623 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32673043-32674042 Theobroma cacao
Thecc1EG004623 1.0kb downstream 1.0kb downstream 4107 true scaffold_1: 32668936-32673042 Theobroma cacao
Thecc1EG004623 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32668936-32669935 Theobroma cacao
Thecc1EG004623 2.0kb upstream 2.0kb upstream 5107 true scaffold_1: 32669936-32675042 Theobroma cacao
Thecc1EG004623 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32673043-32675042 Theobroma cacao
Thecc1EG004623 2.0kb downstream 2.0kb downstream 5107 true scaffold_1: 32667936-32673042 Theobroma cacao
Thecc1EG004623 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32667936-32669935 Theobroma cacao
Thecc1EG004623 5.0kb upstream 5.0kb upstream 8107 true scaffold_1: 32669936-32678042 Theobroma cacao
Thecc1EG004623 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32673043-32678042 Theobroma cacao
Thecc1EG004623 5.0kb downstream 5.0kb downstream 8107 true scaffold_1: 32664936-32673042 Theobroma cacao
Thecc1EG004623 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32664936-32669935 Theobroma cacao
Thecc1EG004623 10.0kb upstream 10.0kb upstream 13107 true scaffold_1: 32669936-32683042 Theobroma cacao
Thecc1EG004623 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32673043-32683042 Theobroma cacao
Thecc1EG004623 10.0kb downstream 10.0kb downstream 13107 true scaffold_1: 32659936-32673042 Theobroma cacao
Thecc1EG004623 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32659936-32669935 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833472 5264 Brassicales-Malvales View MSA
124339455 5266 SBM View MSA
124245005 5268 Malvidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain