Gene : Thecc1EG004558 T. cacao v1.1

Defline:  (1 of 1) PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Genomic Order:  2915
Name:  ? Thecc1EG004558 Secondary Identifier:  ? PAC:27437188

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004558 0.5kb upstream 0.5kb upstream 6695 true scaffold_1: 32245338-32252032 Theobroma cacao
Thecc1EG004558 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32251533-32252032 Theobroma cacao
Thecc1EG004558 0.5kb downstream 0.5kb downstream 6695 true scaffold_1: 32244838-32251532 Theobroma cacao
Thecc1EG004558 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32244838-32245337 Theobroma cacao
Thecc1EG004558 1.0kb upstream 1.0kb upstream 7195 true scaffold_1: 32245338-32252532 Theobroma cacao
Thecc1EG004558 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32251533-32252532 Theobroma cacao
Thecc1EG004558 1.0kb downstream 1.0kb downstream 7195 true scaffold_1: 32244338-32251532 Theobroma cacao
Thecc1EG004558 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32244338-32245337 Theobroma cacao
Thecc1EG004558 2.0kb upstream 2.0kb upstream 8195 true scaffold_1: 32245338-32253532 Theobroma cacao
Thecc1EG004558 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32251533-32253532 Theobroma cacao
Thecc1EG004558 2.0kb downstream 2.0kb downstream 8195 true scaffold_1: 32243338-32251532 Theobroma cacao
Thecc1EG004558 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32243338-32245337 Theobroma cacao
Thecc1EG004558 5.0kb upstream 5.0kb upstream 11195 true scaffold_1: 32245338-32256532 Theobroma cacao
Thecc1EG004558 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32251533-32256532 Theobroma cacao
Thecc1EG004558 5.0kb downstream 5.0kb downstream 11195 true scaffold_1: 32240338-32251532 Theobroma cacao
Thecc1EG004558 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32240338-32245337 Theobroma cacao
Thecc1EG004558 10.0kb upstream 10.0kb upstream 16195 true scaffold_1: 32245338-32261532 Theobroma cacao
Thecc1EG004558 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32251533-32261532 Theobroma cacao
Thecc1EG004558 10.0kb downstream 10.0kb downstream 16195 true scaffold_1: 32235338-32251532 Theobroma cacao
Thecc1EG004558 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32235338-32245337 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832844 5264 Brassicales-Malvales View MSA
124342134 5266 SBM View MSA
124244303 5268 Malvidae View MSA
124067550 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain