Gene : Thecc1EG004553 T. cacao v1.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF10 - OTU DOMAIN CONTAINING PROTEIN // PROTEIN OTUB-3, ISOFORM B Genomic Order:  2910
Name:  ? Thecc1EG004553 Secondary Identifier:  ? PAC:27436641
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004553 0.5kb upstream 0.5kb upstream 13363 true scaffold_1: 32215873-32229235 Theobroma cacao
Thecc1EG004553 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32215873-32216372 Theobroma cacao
Thecc1EG004553 0.5kb downstream 0.5kb downstream 13363 true scaffold_1: 32216373-32229735 Theobroma cacao
Thecc1EG004553 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32229236-32229735 Theobroma cacao
Thecc1EG004553 1.0kb upstream 1.0kb upstream 13863 true scaffold_1: 32215373-32229235 Theobroma cacao
Thecc1EG004553 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32215373-32216372 Theobroma cacao
Thecc1EG004553 1.0kb downstream 1.0kb downstream 13863 true scaffold_1: 32216373-32230235 Theobroma cacao
Thecc1EG004553 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32229236-32230235 Theobroma cacao
Thecc1EG004553 2.0kb upstream 2.0kb upstream 14863 true scaffold_1: 32214373-32229235 Theobroma cacao
Thecc1EG004553 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32214373-32216372 Theobroma cacao
Thecc1EG004553 2.0kb downstream 2.0kb downstream 14863 true scaffold_1: 32216373-32231235 Theobroma cacao
Thecc1EG004553 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32229236-32231235 Theobroma cacao
Thecc1EG004553 5.0kb upstream 5.0kb upstream 17863 true scaffold_1: 32211373-32229235 Theobroma cacao
Thecc1EG004553 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32211373-32216372 Theobroma cacao
Thecc1EG004553 5.0kb downstream 5.0kb downstream 17863 true scaffold_1: 32216373-32234235 Theobroma cacao
Thecc1EG004553 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32229236-32234235 Theobroma cacao
Thecc1EG004553 10.0kb upstream 10.0kb upstream 22863 true scaffold_1: 32206373-32229235 Theobroma cacao
Thecc1EG004553 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32206373-32216372 Theobroma cacao
Thecc1EG004553 10.0kb downstream 10.0kb downstream 22863 true scaffold_1: 32216373-32239235 Theobroma cacao
Thecc1EG004553 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32229236-32239235 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827519 5264 Brassicales-Malvales View MSA
124342737 5266 SBM View MSA
124252177 5268 Malvidae View MSA
124062666 5270 Rosid View MSA
123738342 5271 Pentapetalae View MSA
122787520 5272 Eudicot View MSA
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain