Gene : Thecc1EG004544 T. cacao v1.1
Defline:  (1 of 1) PTHR15657:SF1 - THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26 Genomic Order:  2901
Name:  ? Thecc1EG004544 Secondary Identifier:  ? PAC:27436748
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004544 0.5kb upstream 0.5kb upstream 3914 true scaffold_1: 32170974-32174887 Theobroma cacao
Thecc1EG004544 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32174388-32174887 Theobroma cacao
Thecc1EG004544 0.5kb downstream 0.5kb downstream 3914 true scaffold_1: 32170474-32174387 Theobroma cacao
Thecc1EG004544 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32170474-32170973 Theobroma cacao
Thecc1EG004544 1.0kb upstream 1.0kb upstream 4414 true scaffold_1: 32170974-32175387 Theobroma cacao
Thecc1EG004544 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32174388-32175387 Theobroma cacao
Thecc1EG004544 1.0kb downstream 1.0kb downstream 4414 true scaffold_1: 32169974-32174387 Theobroma cacao
Thecc1EG004544 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32169974-32170973 Theobroma cacao
Thecc1EG004544 2.0kb upstream 2.0kb upstream 5414 true scaffold_1: 32170974-32176387 Theobroma cacao
Thecc1EG004544 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32174388-32176387 Theobroma cacao
Thecc1EG004544 2.0kb downstream 2.0kb downstream 5414 true scaffold_1: 32168974-32174387 Theobroma cacao
Thecc1EG004544 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32168974-32170973 Theobroma cacao
Thecc1EG004544 5.0kb upstream 5.0kb upstream 8414 true scaffold_1: 32170974-32179387 Theobroma cacao
Thecc1EG004544 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32174388-32179387 Theobroma cacao
Thecc1EG004544 5.0kb downstream 5.0kb downstream 8414 true scaffold_1: 32165974-32174387 Theobroma cacao
Thecc1EG004544 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32165974-32170973 Theobroma cacao
Thecc1EG004544 10.0kb upstream 10.0kb upstream 13414 true scaffold_1: 32170974-32184387 Theobroma cacao
Thecc1EG004544 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32174388-32184387 Theobroma cacao
Thecc1EG004544 10.0kb downstream 10.0kb downstream 13414 true scaffold_1: 32160974-32174387 Theobroma cacao
Thecc1EG004544 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32160974-32170973 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815300 5264 Brassicales-Malvales Singleton cluster - no MSA
124311735 5266 SBM Singleton cluster - no MSA
124248791 5268 Malvidae View MSA
124065929 5270 Rosid View MSA
123736421 5271 Pentapetalae View MSA
122791858 5272 Eudicot View MSA
122042448 5273 Angiosperm View MSA
121343985 5274 Embryophyte View MSA
123426667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain