Gene : Thecc1EG004521 T. cacao v1.1
Defline:  (1 of 6) 1.1.1.331 - Secoisolariciresinol dehydrogenase Genomic Order:  2886
Name:  ? Thecc1EG004521 Secondary Identifier:  ? PAC:27434433
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004521 0.5kb upstream 0.5kb upstream 5394 true scaffold_1: 32027183-32032576 Theobroma cacao
Thecc1EG004521 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32027183-32027682 Theobroma cacao
Thecc1EG004521 0.5kb downstream 0.5kb downstream 5394 true scaffold_1: 32027683-32033076 Theobroma cacao
Thecc1EG004521 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32032577-32033076 Theobroma cacao
Thecc1EG004521 1.0kb upstream 1.0kb upstream 5894 true scaffold_1: 32026683-32032576 Theobroma cacao
Thecc1EG004521 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32026683-32027682 Theobroma cacao
Thecc1EG004521 1.0kb downstream 1.0kb downstream 5894 true scaffold_1: 32027683-32033576 Theobroma cacao
Thecc1EG004521 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32032577-32033576 Theobroma cacao
Thecc1EG004521 2.0kb upstream 2.0kb upstream 6894 true scaffold_1: 32025683-32032576 Theobroma cacao
Thecc1EG004521 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32025683-32027682 Theobroma cacao
Thecc1EG004521 2.0kb downstream 2.0kb downstream 6894 true scaffold_1: 32027683-32034576 Theobroma cacao
Thecc1EG004521 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32032577-32034576 Theobroma cacao
Thecc1EG004521 5.0kb upstream 5.0kb upstream 9894 true scaffold_1: 32022683-32032576 Theobroma cacao
Thecc1EG004521 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32022683-32027682 Theobroma cacao
Thecc1EG004521 5.0kb downstream 5.0kb downstream 9894 true scaffold_1: 32027683-32037576 Theobroma cacao
Thecc1EG004521 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32032577-32037576 Theobroma cacao
Thecc1EG004521 10.0kb upstream 10.0kb upstream 14894 true scaffold_1: 32017683-32032576 Theobroma cacao
Thecc1EG004521 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32017683-32027682 Theobroma cacao
Thecc1EG004521 10.0kb downstream 10.0kb downstream 14894 true scaffold_1: 32027683-32042576 Theobroma cacao
Thecc1EG004521 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32032577-32042576 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836275 5264 Brassicales-Malvales View MSA
124342494 5266 SBM View MSA
124240926 5268 Malvidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain