Gene : Thecc1EG004494 T. cacao v1.1
Defline:  (1 of 1) PTHR23024:SF98 - GIBBERELLIN RECEPTOR GID1B Genomic Order:  2862
Name:  ? Thecc1EG004494 Secondary Identifier:  ? PAC:27436025
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6303 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004494 0.5kb upstream 0.5kb upstream 3152 true scaffold_1: 31901104-31904255 Theobroma cacao
Thecc1EG004494 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31903756-31904255 Theobroma cacao
Thecc1EG004494 0.5kb downstream 0.5kb downstream 3152 true scaffold_1: 31900604-31903755 Theobroma cacao
Thecc1EG004494 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31900604-31901103 Theobroma cacao
Thecc1EG004494 1.0kb upstream 1.0kb upstream 3652 true scaffold_1: 31901104-31904755 Theobroma cacao
Thecc1EG004494 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31903756-31904755 Theobroma cacao
Thecc1EG004494 1.0kb downstream 1.0kb downstream 3652 true scaffold_1: 31900104-31903755 Theobroma cacao
Thecc1EG004494 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31900104-31901103 Theobroma cacao
Thecc1EG004494 2.0kb upstream 2.0kb upstream 4652 true scaffold_1: 31901104-31905755 Theobroma cacao
Thecc1EG004494 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31903756-31905755 Theobroma cacao
Thecc1EG004494 2.0kb downstream 2.0kb downstream 4652 true scaffold_1: 31899104-31903755 Theobroma cacao
Thecc1EG004494 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31899104-31901103 Theobroma cacao
Thecc1EG004494 5.0kb upstream 5.0kb upstream 7652 true scaffold_1: 31901104-31908755 Theobroma cacao
Thecc1EG004494 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31903756-31908755 Theobroma cacao
Thecc1EG004494 5.0kb downstream 5.0kb downstream 7652 true scaffold_1: 31896104-31903755 Theobroma cacao
Thecc1EG004494 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31896104-31901103 Theobroma cacao
Thecc1EG004494 10.0kb upstream 10.0kb upstream 12652 true scaffold_1: 31901104-31913755 Theobroma cacao
Thecc1EG004494 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31903756-31913755 Theobroma cacao
Thecc1EG004494 10.0kb downstream 10.0kb downstream 12652 true scaffold_1: 31891104-31903755 Theobroma cacao
Thecc1EG004494 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31891104-31901103 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827560 5264 Brassicales-Malvales View MSA
124336424 5266 SBM View MSA
124241929 5268 Malvidae View MSA
124064220 5270 Rosid View MSA
123745605 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain