Gene : Thecc1EG004471 T. cacao v1.1
Defline:  (1 of 2) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  2843
Name:  ? Thecc1EG004471 Secondary Identifier:  ? PAC:27435186
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004471 0.5kb upstream 0.5kb upstream 3815 true scaffold_1: 31765848-31769662 Theobroma cacao
Thecc1EG004471 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31769163-31769662 Theobroma cacao
Thecc1EG004471 0.5kb downstream 0.5kb downstream 3815 true scaffold_1: 31765348-31769162 Theobroma cacao
Thecc1EG004471 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31765348-31765847 Theobroma cacao
Thecc1EG004471 1.0kb upstream 1.0kb upstream 4315 true scaffold_1: 31765848-31770162 Theobroma cacao
Thecc1EG004471 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31769163-31770162 Theobroma cacao
Thecc1EG004471 1.0kb downstream 1.0kb downstream 4315 true scaffold_1: 31764848-31769162 Theobroma cacao
Thecc1EG004471 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31764848-31765847 Theobroma cacao
Thecc1EG004471 2.0kb upstream 2.0kb upstream 5315 true scaffold_1: 31765848-31771162 Theobroma cacao
Thecc1EG004471 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31769163-31771162 Theobroma cacao
Thecc1EG004471 2.0kb downstream 2.0kb downstream 5315 true scaffold_1: 31763848-31769162 Theobroma cacao
Thecc1EG004471 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31763848-31765847 Theobroma cacao
Thecc1EG004471 5.0kb upstream 5.0kb upstream 8315 true scaffold_1: 31765848-31774162 Theobroma cacao
Thecc1EG004471 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31769163-31774162 Theobroma cacao
Thecc1EG004471 5.0kb downstream 5.0kb downstream 8315 true scaffold_1: 31760848-31769162 Theobroma cacao
Thecc1EG004471 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31760848-31765847 Theobroma cacao
Thecc1EG004471 10.0kb upstream 10.0kb upstream 13315 true scaffold_1: 31765848-31779162 Theobroma cacao
Thecc1EG004471 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31769163-31779162 Theobroma cacao
Thecc1EG004471 10.0kb downstream 10.0kb downstream 13315 true scaffold_1: 31755848-31769162 Theobroma cacao
Thecc1EG004471 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31755848-31765847 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841219 5264 Brassicales-Malvales View MSA
124338693 5266 SBM View MSA
124239302 5268 Malvidae View MSA
124068564 5270 Rosid View MSA
123737576 5271 Pentapetalae View MSA
122787976 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain