Gene : Thecc1EG004474 T. cacao v1.1
Defline:  (1 of 2) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  2844
Name:  ? Thecc1EG004474 Secondary Identifier:  ? PAC:27434476
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004474 0.5kb upstream 0.5kb upstream 2093 true scaffold_1: 31779577-31781669 Theobroma cacao
Thecc1EG004474 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 31781170-31781669 Theobroma cacao
Thecc1EG004474 0.5kb downstream 0.5kb downstream 2093 true scaffold_1: 31779077-31781169 Theobroma cacao
Thecc1EG004474 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 31779077-31779576 Theobroma cacao
Thecc1EG004474 1.0kb upstream 1.0kb upstream 2593 true scaffold_1: 31779577-31782169 Theobroma cacao
Thecc1EG004474 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 31781170-31782169 Theobroma cacao
Thecc1EG004474 1.0kb downstream 1.0kb downstream 2593 true scaffold_1: 31778577-31781169 Theobroma cacao
Thecc1EG004474 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 31778577-31779576 Theobroma cacao
Thecc1EG004474 2.0kb upstream 2.0kb upstream 3593 true scaffold_1: 31779577-31783169 Theobroma cacao
Thecc1EG004474 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 31781170-31783169 Theobroma cacao
Thecc1EG004474 2.0kb downstream 2.0kb downstream 3593 true scaffold_1: 31777577-31781169 Theobroma cacao
Thecc1EG004474 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 31777577-31779576 Theobroma cacao
Thecc1EG004474 5.0kb upstream 5.0kb upstream 6593 true scaffold_1: 31779577-31786169 Theobroma cacao
Thecc1EG004474 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 31781170-31786169 Theobroma cacao
Thecc1EG004474 5.0kb downstream 5.0kb downstream 6593 true scaffold_1: 31774577-31781169 Theobroma cacao
Thecc1EG004474 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 31774577-31779576 Theobroma cacao
Thecc1EG004474 10.0kb upstream 10.0kb upstream 11593 true scaffold_1: 31779577-31791169 Theobroma cacao
Thecc1EG004474 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 31781170-31791169 Theobroma cacao
Thecc1EG004474 10.0kb downstream 10.0kb downstream 11593 true scaffold_1: 31769577-31781169 Theobroma cacao
Thecc1EG004474 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 31769577-31779576 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841219 5264 Brassicales-Malvales View MSA
124338693 5266 SBM View MSA
124239302 5268 Malvidae View MSA
124068564 5270 Rosid View MSA
123737576 5271 Pentapetalae View MSA
122787976 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain