Gene : Thecc1EG004750 T. cacao v1.1
Defline:  (1 of 1) PTHR11467//PTHR11467:SF44 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Genomic Order:  3067
Name:  ? Thecc1EG004750 Secondary Identifier:  ? PAC:27433041
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004750 0.5kb upstream 0.5kb upstream 1675 true scaffold_1: 33295287-33296961 Theobroma cacao
Thecc1EG004750 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33296462-33296961 Theobroma cacao
Thecc1EG004750 0.5kb downstream 0.5kb downstream 1675 true scaffold_1: 33294787-33296461 Theobroma cacao
Thecc1EG004750 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33294787-33295286 Theobroma cacao
Thecc1EG004750 1.0kb upstream 1.0kb upstream 2175 true scaffold_1: 33295287-33297461 Theobroma cacao
Thecc1EG004750 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33296462-33297461 Theobroma cacao
Thecc1EG004750 1.0kb downstream 1.0kb downstream 2175 true scaffold_1: 33294287-33296461 Theobroma cacao
Thecc1EG004750 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33294287-33295286 Theobroma cacao
Thecc1EG004750 2.0kb upstream 2.0kb upstream 3175 true scaffold_1: 33295287-33298461 Theobroma cacao
Thecc1EG004750 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33296462-33298461 Theobroma cacao
Thecc1EG004750 2.0kb downstream 2.0kb downstream 3175 true scaffold_1: 33293287-33296461 Theobroma cacao
Thecc1EG004750 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33293287-33295286 Theobroma cacao
Thecc1EG004750 5.0kb upstream 5.0kb upstream 6175 true scaffold_1: 33295287-33301461 Theobroma cacao
Thecc1EG004750 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33296462-33301461 Theobroma cacao
Thecc1EG004750 5.0kb downstream 5.0kb downstream 6175 true scaffold_1: 33290287-33296461 Theobroma cacao
Thecc1EG004750 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33290287-33295286 Theobroma cacao
Thecc1EG004750 10.0kb upstream 10.0kb upstream 11175 true scaffold_1: 33295287-33306461 Theobroma cacao
Thecc1EG004750 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33296462-33306461 Theobroma cacao
Thecc1EG004750 10.0kb downstream 10.0kb downstream 11175 true scaffold_1: 33285287-33296461 Theobroma cacao
Thecc1EG004750 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33285287-33295286 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824375 5264 Brassicales-Malvales View MSA
124320161 5266 SBM View MSA
124248547 5268 Malvidae View MSA
124069968 5270 Rosid View MSA
123742251 5271 Pentapetalae View MSA
122797183 5272 Eudicot View MSA
122049683 5273 Angiosperm View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain