Gene : Thecc1EG004743 T. cacao v1.1
Defline:  (1 of 12) PF04833 - COBRA-like protein (COBRA) Genomic Order:  3060
Name:  ? Thecc1EG004743 Secondary Identifier:  ? PAC:27431358
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004743 0.5kb upstream 0.5kb upstream 3803 true scaffold_1: 33251389-33255191 Theobroma cacao
Thecc1EG004743 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33254692-33255191 Theobroma cacao
Thecc1EG004743 0.5kb downstream 0.5kb downstream 3803 true scaffold_1: 33250889-33254691 Theobroma cacao
Thecc1EG004743 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33250889-33251388 Theobroma cacao
Thecc1EG004743 1.0kb upstream 1.0kb upstream 4303 true scaffold_1: 33251389-33255691 Theobroma cacao
Thecc1EG004743 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33254692-33255691 Theobroma cacao
Thecc1EG004743 1.0kb downstream 1.0kb downstream 4303 true scaffold_1: 33250389-33254691 Theobroma cacao
Thecc1EG004743 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33250389-33251388 Theobroma cacao
Thecc1EG004743 2.0kb upstream 2.0kb upstream 5303 true scaffold_1: 33251389-33256691 Theobroma cacao
Thecc1EG004743 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33254692-33256691 Theobroma cacao
Thecc1EG004743 2.0kb downstream 2.0kb downstream 5303 true scaffold_1: 33249389-33254691 Theobroma cacao
Thecc1EG004743 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33249389-33251388 Theobroma cacao
Thecc1EG004743 5.0kb upstream 5.0kb upstream 8303 true scaffold_1: 33251389-33259691 Theobroma cacao
Thecc1EG004743 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33254692-33259691 Theobroma cacao
Thecc1EG004743 5.0kb downstream 5.0kb downstream 8303 true scaffold_1: 33246389-33254691 Theobroma cacao
Thecc1EG004743 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33246389-33251388 Theobroma cacao
Thecc1EG004743 10.0kb upstream 10.0kb upstream 13303 true scaffold_1: 33251389-33264691 Theobroma cacao
Thecc1EG004743 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33254692-33264691 Theobroma cacao
Thecc1EG004743 10.0kb downstream 10.0kb downstream 13303 true scaffold_1: 33241389-33254691 Theobroma cacao
Thecc1EG004743 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33241389-33251388 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826335 5264 Brassicales-Malvales View MSA
124320993 5266 SBM View MSA
124248222 5268 Malvidae View MSA
123952235 5270 Rosid View MSA
123753215 5271 Pentapetalae View MSA
122797556 5272 Eudicot View MSA
122048616 5273 Angiosperm View MSA
121351657 5274 Embryophyte View MSA
123382264 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain