Gene : Thecc1EG004729 T. cacao v1.1
Defline:  (1 of 1) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  3047
Name:  ? Thecc1EG004729 Secondary Identifier:  ? PAC:27432000
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004729 0.5kb upstream 0.5kb upstream 5939 true scaffold_1: 33175128-33181066 Theobroma cacao
Thecc1EG004729 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33180567-33181066 Theobroma cacao
Thecc1EG004729 0.5kb downstream 0.5kb downstream 5939 true scaffold_1: 33174628-33180566 Theobroma cacao
Thecc1EG004729 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33174628-33175127 Theobroma cacao
Thecc1EG004729 1.0kb upstream 1.0kb upstream 6439 true scaffold_1: 33175128-33181566 Theobroma cacao
Thecc1EG004729 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33180567-33181566 Theobroma cacao
Thecc1EG004729 1.0kb downstream 1.0kb downstream 6439 true scaffold_1: 33174128-33180566 Theobroma cacao
Thecc1EG004729 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33174128-33175127 Theobroma cacao
Thecc1EG004729 2.0kb upstream 2.0kb upstream 7439 true scaffold_1: 33175128-33182566 Theobroma cacao
Thecc1EG004729 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33180567-33182566 Theobroma cacao
Thecc1EG004729 2.0kb downstream 2.0kb downstream 7439 true scaffold_1: 33173128-33180566 Theobroma cacao
Thecc1EG004729 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33173128-33175127 Theobroma cacao
Thecc1EG004729 5.0kb upstream 5.0kb upstream 10439 true scaffold_1: 33175128-33185566 Theobroma cacao
Thecc1EG004729 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33180567-33185566 Theobroma cacao
Thecc1EG004729 5.0kb downstream 5.0kb downstream 10439 true scaffold_1: 33170128-33180566 Theobroma cacao
Thecc1EG004729 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33170128-33175127 Theobroma cacao
Thecc1EG004729 10.0kb upstream 10.0kb upstream 15439 true scaffold_1: 33175128-33190566 Theobroma cacao
Thecc1EG004729 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33180567-33190566 Theobroma cacao
Thecc1EG004729 10.0kb downstream 10.0kb downstream 15439 true scaffold_1: 33165128-33180566 Theobroma cacao
Thecc1EG004729 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33165128-33175127 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829006 5264 Brassicales-Malvales View MSA
124336503 5266 SBM View MSA
124247146 5268 Malvidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain