Gene : Thecc1EG004709 T. cacao v1.1
Defline:  (1 of 7) PTHR33470//PTHR33470:SF1 - FAMILY NOT NAMED // POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  3032
Name:  ? Thecc1EG004709 Secondary Identifier:  ? PAC:27435618
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004709 0.5kb upstream 0.5kb upstream 1975 true scaffold_1: 33085700-33087674 Theobroma cacao
Thecc1EG004709 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33087175-33087674 Theobroma cacao
Thecc1EG004709 0.5kb downstream 0.5kb downstream 1975 true scaffold_1: 33085200-33087174 Theobroma cacao
Thecc1EG004709 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33085200-33085699 Theobroma cacao
Thecc1EG004709 1.0kb upstream 1.0kb upstream 2475 true scaffold_1: 33085700-33088174 Theobroma cacao
Thecc1EG004709 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33087175-33088174 Theobroma cacao
Thecc1EG004709 1.0kb downstream 1.0kb downstream 2475 true scaffold_1: 33084700-33087174 Theobroma cacao
Thecc1EG004709 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33084700-33085699 Theobroma cacao
Thecc1EG004709 2.0kb upstream 2.0kb upstream 3475 true scaffold_1: 33085700-33089174 Theobroma cacao
Thecc1EG004709 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33087175-33089174 Theobroma cacao
Thecc1EG004709 2.0kb downstream 2.0kb downstream 3475 true scaffold_1: 33083700-33087174 Theobroma cacao
Thecc1EG004709 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33083700-33085699 Theobroma cacao
Thecc1EG004709 5.0kb upstream 5.0kb upstream 6475 true scaffold_1: 33085700-33092174 Theobroma cacao
Thecc1EG004709 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33087175-33092174 Theobroma cacao
Thecc1EG004709 5.0kb downstream 5.0kb downstream 6475 true scaffold_1: 33080700-33087174 Theobroma cacao
Thecc1EG004709 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33080700-33085699 Theobroma cacao
Thecc1EG004709 10.0kb upstream 10.0kb upstream 11475 true scaffold_1: 33085700-33097174 Theobroma cacao
Thecc1EG004709 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33087175-33097174 Theobroma cacao
Thecc1EG004709 10.0kb downstream 10.0kb downstream 11475 true scaffold_1: 33075700-33087174 Theobroma cacao
Thecc1EG004709 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33075700-33085699 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839487 5264 Brassicales-Malvales View MSA
124322614 5266 SBM View MSA
124254675 5268 Malvidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain