Gene : Thecc1EG004692 T. cacao v1.1
Defline:  (1 of 2) PTHR14155//PTHR14155:SF117 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL41-RELATED Genomic Order:  3017
Name:  ? Thecc1EG004692 Secondary Identifier:  ? PAC:27437101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004692 0.5kb upstream 0.5kb upstream 1345 true scaffold_1: 32993852-32995196 Theobroma cacao
Thecc1EG004692 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32993852-32994351 Theobroma cacao
Thecc1EG004692 0.5kb downstream 0.5kb downstream 1345 true scaffold_1: 32994352-32995696 Theobroma cacao
Thecc1EG004692 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32995197-32995696 Theobroma cacao
Thecc1EG004692 1.0kb upstream 1.0kb upstream 1845 true scaffold_1: 32993352-32995196 Theobroma cacao
Thecc1EG004692 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32993352-32994351 Theobroma cacao
Thecc1EG004692 1.0kb downstream 1.0kb downstream 1845 true scaffold_1: 32994352-32996196 Theobroma cacao
Thecc1EG004692 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32995197-32996196 Theobroma cacao
Thecc1EG004692 2.0kb upstream 2.0kb upstream 2845 true scaffold_1: 32992352-32995196 Theobroma cacao
Thecc1EG004692 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32992352-32994351 Theobroma cacao
Thecc1EG004692 2.0kb downstream 2.0kb downstream 2845 true scaffold_1: 32994352-32997196 Theobroma cacao
Thecc1EG004692 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32995197-32997196 Theobroma cacao
Thecc1EG004692 5.0kb upstream 5.0kb upstream 5845 true scaffold_1: 32989352-32995196 Theobroma cacao
Thecc1EG004692 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32989352-32994351 Theobroma cacao
Thecc1EG004692 5.0kb downstream 5.0kb downstream 5845 true scaffold_1: 32994352-33000196 Theobroma cacao
Thecc1EG004692 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32995197-33000196 Theobroma cacao
Thecc1EG004692 10.0kb upstream 10.0kb upstream 10845 true scaffold_1: 32984352-32995196 Theobroma cacao
Thecc1EG004692 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32984352-32994351 Theobroma cacao
Thecc1EG004692 10.0kb downstream 10.0kb downstream 10845 true scaffold_1: 32994352-33005196 Theobroma cacao
Thecc1EG004692 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32995197-33005196 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124349697 5266 SBM View MSA
123839174 5264 Brassicales-Malvales View MSA
124253774 5268 Malvidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain