Gene : Thecc1EG004627 T. cacao v1.1
Defline:  (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80) Genomic Order:  2963
Name:  ? Thecc1EG004627 Secondary Identifier:  ? PAC:27435245
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6908 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004627 0.5kb upstream 0.5kb upstream 3403 true scaffold_1: 32696061-32699463 Theobroma cacao
Thecc1EG004627 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 32696061-32696560 Theobroma cacao
Thecc1EG004627 0.5kb downstream 0.5kb downstream 3403 true scaffold_1: 32696561-32699963 Theobroma cacao
Thecc1EG004627 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 32699464-32699963 Theobroma cacao
Thecc1EG004627 1.0kb upstream 1.0kb upstream 3903 true scaffold_1: 32695561-32699463 Theobroma cacao
Thecc1EG004627 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 32695561-32696560 Theobroma cacao
Thecc1EG004627 1.0kb downstream 1.0kb downstream 3903 true scaffold_1: 32696561-32700463 Theobroma cacao
Thecc1EG004627 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 32699464-32700463 Theobroma cacao
Thecc1EG004627 2.0kb upstream 2.0kb upstream 4903 true scaffold_1: 32694561-32699463 Theobroma cacao
Thecc1EG004627 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 32694561-32696560 Theobroma cacao
Thecc1EG004627 2.0kb downstream 2.0kb downstream 4903 true scaffold_1: 32696561-32701463 Theobroma cacao
Thecc1EG004627 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 32699464-32701463 Theobroma cacao
Thecc1EG004627 5.0kb upstream 5.0kb upstream 7903 true scaffold_1: 32691561-32699463 Theobroma cacao
Thecc1EG004627 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 32691561-32696560 Theobroma cacao
Thecc1EG004627 5.0kb downstream 5.0kb downstream 7903 true scaffold_1: 32696561-32704463 Theobroma cacao
Thecc1EG004627 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 32699464-32704463 Theobroma cacao
Thecc1EG004627 10.0kb upstream 10.0kb upstream 12903 true scaffold_1: 32686561-32699463 Theobroma cacao
Thecc1EG004627 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 32686561-32696560 Theobroma cacao
Thecc1EG004627 10.0kb downstream 10.0kb downstream 12903 true scaffold_1: 32696561-32709463 Theobroma cacao
Thecc1EG004627 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 32699464-32709463 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837799 5264 Brassicales-Malvales View MSA
124337669 5266 SBM View MSA
124238319 5268 Malvidae View MSA
124064421 5270 Rosid View MSA
123740086 5271 Pentapetalae View MSA
122769969 5272 Eudicot View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain