Gene : Thecc1EG004906 T. cacao v1.1
Defline:  (1 of 1) 2.1.1.225 - tRNA:m(4)X modification enzyme Genomic Order:  3201
Name:  ? Thecc1EG004906 Secondary Identifier:  ? PAC:27436581
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6829 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004906 0.5kb upstream 0.5kb upstream 3845 true scaffold_1: 34043245-34047089 Theobroma cacao
Thecc1EG004906 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34043245-34043744 Theobroma cacao
Thecc1EG004906 0.5kb downstream 0.5kb downstream 3845 true scaffold_1: 34043745-34047589 Theobroma cacao
Thecc1EG004906 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34047090-34047589 Theobroma cacao
Thecc1EG004906 1.0kb upstream 1.0kb upstream 4345 true scaffold_1: 34042745-34047089 Theobroma cacao
Thecc1EG004906 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34042745-34043744 Theobroma cacao
Thecc1EG004906 1.0kb downstream 1.0kb downstream 4345 true scaffold_1: 34043745-34048089 Theobroma cacao
Thecc1EG004906 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34047090-34048089 Theobroma cacao
Thecc1EG004906 2.0kb upstream 2.0kb upstream 5345 true scaffold_1: 34041745-34047089 Theobroma cacao
Thecc1EG004906 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34041745-34043744 Theobroma cacao
Thecc1EG004906 2.0kb downstream 2.0kb downstream 5345 true scaffold_1: 34043745-34049089 Theobroma cacao
Thecc1EG004906 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34047090-34049089 Theobroma cacao
Thecc1EG004906 5.0kb upstream 5.0kb upstream 8345 true scaffold_1: 34038745-34047089 Theobroma cacao
Thecc1EG004906 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34038745-34043744 Theobroma cacao
Thecc1EG004906 5.0kb downstream 5.0kb downstream 8345 true scaffold_1: 34043745-34052089 Theobroma cacao
Thecc1EG004906 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34047090-34052089 Theobroma cacao
Thecc1EG004906 10.0kb upstream 10.0kb upstream 13345 true scaffold_1: 34033745-34047089 Theobroma cacao
Thecc1EG004906 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34033745-34043744 Theobroma cacao
Thecc1EG004906 10.0kb downstream 10.0kb downstream 13345 true scaffold_1: 34043745-34057089 Theobroma cacao
Thecc1EG004906 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34047090-34057089 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828827 5264 Brassicales-Malvales View MSA
124336653 5266 SBM View MSA
124240790 5268 Malvidae View MSA
124062140 5270 Rosid View MSA
123739890 5271 Pentapetalae View MSA
122785784 5272 Eudicot View MSA
122046541 5273 Angiosperm View MSA
121347915 5274 Embryophyte View MSA
123424709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain