Gene : Thecc1EG004900 T. cacao v1.1
Defline:  (1 of 1) PTHR33824//PTHR33824:SF3 - FAMILY NOT NAMED // POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED Genomic Order:  3195
Name:  ? Thecc1EG004900 Secondary Identifier:  ? PAC:27433825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004900 0.5kb upstream 0.5kb upstream 3192 true scaffold_1: 34013790-34016981 Theobroma cacao
Thecc1EG004900 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34016482-34016981 Theobroma cacao
Thecc1EG004900 0.5kb downstream 0.5kb downstream 3192 true scaffold_1: 34013290-34016481 Theobroma cacao
Thecc1EG004900 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34013290-34013789 Theobroma cacao
Thecc1EG004900 1.0kb upstream 1.0kb upstream 3692 true scaffold_1: 34013790-34017481 Theobroma cacao
Thecc1EG004900 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34016482-34017481 Theobroma cacao
Thecc1EG004900 1.0kb downstream 1.0kb downstream 3692 true scaffold_1: 34012790-34016481 Theobroma cacao
Thecc1EG004900 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34012790-34013789 Theobroma cacao
Thecc1EG004900 2.0kb upstream 2.0kb upstream 4692 true scaffold_1: 34013790-34018481 Theobroma cacao
Thecc1EG004900 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34016482-34018481 Theobroma cacao
Thecc1EG004900 2.0kb downstream 2.0kb downstream 4692 true scaffold_1: 34011790-34016481 Theobroma cacao
Thecc1EG004900 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34011790-34013789 Theobroma cacao
Thecc1EG004900 5.0kb upstream 5.0kb upstream 7692 true scaffold_1: 34013790-34021481 Theobroma cacao
Thecc1EG004900 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34016482-34021481 Theobroma cacao
Thecc1EG004900 5.0kb downstream 5.0kb downstream 7692 true scaffold_1: 34008790-34016481 Theobroma cacao
Thecc1EG004900 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34008790-34013789 Theobroma cacao
Thecc1EG004900 10.0kb upstream 10.0kb upstream 12692 true scaffold_1: 34013790-34026481 Theobroma cacao
Thecc1EG004900 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34016482-34026481 Theobroma cacao
Thecc1EG004900 10.0kb downstream 10.0kb downstream 12692 true scaffold_1: 34003790-34016481 Theobroma cacao
Thecc1EG004900 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34003790-34013789 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831729 5264 Brassicales-Malvales View MSA
124340151 5266 SBM View MSA
124239054 5268 Malvidae View MSA
124063250 5270 Rosid View MSA
123741209 5271 Pentapetalae View MSA
122787118 5272 Eudicot View MSA
122046905 5273 Angiosperm View MSA
121345017 5274 Embryophyte View MSA
123427878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain