Gene : Thecc1EG004902 T. cacao v1.1
Defline:  (1 of 1) 1.1.1.145 - 3-beta-hydroxy-Delta(5)-steroid dehydrogenase / Progesterone reductase Genomic Order:  3197
Name:  ? Thecc1EG004902 Secondary Identifier:  ? PAC:27431533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004902 0.5kb upstream 0.5kb upstream 1824 true scaffold_1: 34030794-34032617 Theobroma cacao
Thecc1EG004902 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34030794-34031293 Theobroma cacao
Thecc1EG004902 0.5kb downstream 0.5kb downstream 1824 true scaffold_1: 34031294-34033117 Theobroma cacao
Thecc1EG004902 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34032618-34033117 Theobroma cacao
Thecc1EG004902 1.0kb upstream 1.0kb upstream 2324 true scaffold_1: 34030294-34032617 Theobroma cacao
Thecc1EG004902 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34030294-34031293 Theobroma cacao
Thecc1EG004902 1.0kb downstream 1.0kb downstream 2324 true scaffold_1: 34031294-34033617 Theobroma cacao
Thecc1EG004902 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34032618-34033617 Theobroma cacao
Thecc1EG004902 2.0kb upstream 2.0kb upstream 3324 true scaffold_1: 34029294-34032617 Theobroma cacao
Thecc1EG004902 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34029294-34031293 Theobroma cacao
Thecc1EG004902 2.0kb downstream 2.0kb downstream 3324 true scaffold_1: 34031294-34034617 Theobroma cacao
Thecc1EG004902 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34032618-34034617 Theobroma cacao
Thecc1EG004902 5.0kb upstream 5.0kb upstream 6324 true scaffold_1: 34026294-34032617 Theobroma cacao
Thecc1EG004902 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34026294-34031293 Theobroma cacao
Thecc1EG004902 5.0kb downstream 5.0kb downstream 6324 true scaffold_1: 34031294-34037617 Theobroma cacao
Thecc1EG004902 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34032618-34037617 Theobroma cacao
Thecc1EG004902 10.0kb upstream 10.0kb upstream 11324 true scaffold_1: 34021294-34032617 Theobroma cacao
Thecc1EG004902 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34021294-34031293 Theobroma cacao
Thecc1EG004902 10.0kb downstream 10.0kb downstream 11324 true scaffold_1: 34031294-34042617 Theobroma cacao
Thecc1EG004902 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34032618-34042617 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841481 5264 Brassicales-Malvales View MSA
124340680 5266 SBM View MSA
124251999 5268 Malvidae View MSA
124066555 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain