Gene : Thecc1EG004876 T. cacao v1.1
Defline:  (1 of 29) K01051 - pectinesterase (E3.1.1.11) Genomic Order:  3173
Name:  ? Thecc1EG004876 Secondary Identifier:  ? PAC:27435739
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004876 0.5kb upstream 0.5kb upstream 3685 true scaffold_1: 33901580-33905264 Theobroma cacao
Thecc1EG004876 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33904765-33905264 Theobroma cacao
Thecc1EG004876 0.5kb downstream 0.5kb downstream 3685 true scaffold_1: 33901080-33904764 Theobroma cacao
Thecc1EG004876 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33901080-33901579 Theobroma cacao
Thecc1EG004876 1.0kb upstream 1.0kb upstream 4185 true scaffold_1: 33901580-33905764 Theobroma cacao
Thecc1EG004876 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33904765-33905764 Theobroma cacao
Thecc1EG004876 1.0kb downstream 1.0kb downstream 4185 true scaffold_1: 33900580-33904764 Theobroma cacao
Thecc1EG004876 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33900580-33901579 Theobroma cacao
Thecc1EG004876 2.0kb upstream 2.0kb upstream 5185 true scaffold_1: 33901580-33906764 Theobroma cacao
Thecc1EG004876 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33904765-33906764 Theobroma cacao
Thecc1EG004876 2.0kb downstream 2.0kb downstream 5185 true scaffold_1: 33899580-33904764 Theobroma cacao
Thecc1EG004876 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33899580-33901579 Theobroma cacao
Thecc1EG004876 5.0kb upstream 5.0kb upstream 8185 true scaffold_1: 33901580-33909764 Theobroma cacao
Thecc1EG004876 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33904765-33909764 Theobroma cacao
Thecc1EG004876 5.0kb downstream 5.0kb downstream 8185 true scaffold_1: 33896580-33904764 Theobroma cacao
Thecc1EG004876 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33896580-33901579 Theobroma cacao
Thecc1EG004876 10.0kb upstream 10.0kb upstream 13185 true scaffold_1: 33901580-33914764 Theobroma cacao
Thecc1EG004876 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33904765-33914764 Theobroma cacao
Thecc1EG004876 10.0kb downstream 10.0kb downstream 13185 true scaffold_1: 33891580-33904764 Theobroma cacao
Thecc1EG004876 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33891580-33901579 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824958 5264 Brassicales-Malvales View MSA
124349452 5266 SBM View MSA
124246435 5268 Malvidae View MSA
124071464 5270 Rosid View MSA
123744111 5271 Pentapetalae View MSA
122794965 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain