Gene : Thecc1EG004826 T. cacao v1.1
Defline:  (1 of 1) K12835 - ATP-dependent RNA helicase DDX42 (DDX42, SF3B125) Genomic Order:  3132
Name:  ? Thecc1EG004826 Secondary Identifier:  ? PAC:27434529
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004826 0.5kb upstream 0.5kb upstream 5442 true scaffold_1: 33651929-33657370 Theobroma cacao
Thecc1EG004826 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33651929-33652428 Theobroma cacao
Thecc1EG004826 0.5kb downstream 0.5kb downstream 5442 true scaffold_1: 33652429-33657870 Theobroma cacao
Thecc1EG004826 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33657371-33657870 Theobroma cacao
Thecc1EG004826 1.0kb upstream 1.0kb upstream 5942 true scaffold_1: 33651429-33657370 Theobroma cacao
Thecc1EG004826 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33651429-33652428 Theobroma cacao
Thecc1EG004826 1.0kb downstream 1.0kb downstream 5942 true scaffold_1: 33652429-33658370 Theobroma cacao
Thecc1EG004826 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33657371-33658370 Theobroma cacao
Thecc1EG004826 2.0kb upstream 2.0kb upstream 6942 true scaffold_1: 33650429-33657370 Theobroma cacao
Thecc1EG004826 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33650429-33652428 Theobroma cacao
Thecc1EG004826 2.0kb downstream 2.0kb downstream 6942 true scaffold_1: 33652429-33659370 Theobroma cacao
Thecc1EG004826 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33657371-33659370 Theobroma cacao
Thecc1EG004826 5.0kb upstream 5.0kb upstream 9942 true scaffold_1: 33647429-33657370 Theobroma cacao
Thecc1EG004826 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33647429-33652428 Theobroma cacao
Thecc1EG004826 5.0kb downstream 5.0kb downstream 9942 true scaffold_1: 33652429-33662370 Theobroma cacao
Thecc1EG004826 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33657371-33662370 Theobroma cacao
Thecc1EG004826 10.0kb upstream 10.0kb upstream 14942 true scaffold_1: 33642429-33657370 Theobroma cacao
Thecc1EG004826 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33642429-33652428 Theobroma cacao
Thecc1EG004826 10.0kb downstream 10.0kb downstream 14942 true scaffold_1: 33652429-33667370 Theobroma cacao
Thecc1EG004826 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33657371-33667370 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831429 5264 Brassicales-Malvales View MSA
124342518 5266 SBM View MSA
124250487 5268 Malvidae View MSA
124063721 5270 Rosid View MSA
123739666 5271 Pentapetalae View MSA
122787130 5272 Eudicot View MSA
122042698 5273 Angiosperm View MSA
123429150 5275 Viridiplantae View MSA
121344325 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain