Gene : Thecc1EG004822 T. cacao v1.1
Defline:  (1 of 1) PTHR10381//PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  3128
Name:  ? Thecc1EG004822 Secondary Identifier:  ? PAC:27431962
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004822 0.5kb upstream 0.5kb upstream 6099 true scaffold_1: 33631406-33637504 Theobroma cacao
Thecc1EG004822 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33637005-33637504 Theobroma cacao
Thecc1EG004822 0.5kb downstream 0.5kb downstream 6099 true scaffold_1: 33630906-33637004 Theobroma cacao
Thecc1EG004822 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33630906-33631405 Theobroma cacao
Thecc1EG004822 1.0kb upstream 1.0kb upstream 6599 true scaffold_1: 33631406-33638004 Theobroma cacao
Thecc1EG004822 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33637005-33638004 Theobroma cacao
Thecc1EG004822 1.0kb downstream 1.0kb downstream 6599 true scaffold_1: 33630406-33637004 Theobroma cacao
Thecc1EG004822 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33630406-33631405 Theobroma cacao
Thecc1EG004822 2.0kb upstream 2.0kb upstream 7599 true scaffold_1: 33631406-33639004 Theobroma cacao
Thecc1EG004822 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33637005-33639004 Theobroma cacao
Thecc1EG004822 2.0kb downstream 2.0kb downstream 7599 true scaffold_1: 33629406-33637004 Theobroma cacao
Thecc1EG004822 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33629406-33631405 Theobroma cacao
Thecc1EG004822 5.0kb upstream 5.0kb upstream 10599 true scaffold_1: 33631406-33642004 Theobroma cacao
Thecc1EG004822 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33637005-33642004 Theobroma cacao
Thecc1EG004822 5.0kb downstream 5.0kb downstream 10599 true scaffold_1: 33626406-33637004 Theobroma cacao
Thecc1EG004822 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33626406-33631405 Theobroma cacao
Thecc1EG004822 10.0kb upstream 10.0kb upstream 15599 true scaffold_1: 33631406-33647004 Theobroma cacao
Thecc1EG004822 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33637005-33647004 Theobroma cacao
Thecc1EG004822 10.0kb downstream 10.0kb downstream 15599 true scaffold_1: 33621406-33637004 Theobroma cacao
Thecc1EG004822 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33621406-33631405 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827737 5264 Brassicales-Malvales View MSA
124337563 5266 SBM View MSA
124252870 5268 Malvidae View MSA
124067501 5270 Rosid View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain