Gene : Thecc1EG004792 T. cacao v1.1

Defline:  (1 of 1) PTHR31964//PTHR31964:SF52 - FAMILY NOT NAMED // DROUGHT RESPONSIVE ATP-BINDING MOTIF CONTAINING PROTEIN Genomic Order:  3105
Name:  ? Thecc1EG004792 Secondary Identifier:  ? PAC:27432536

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004792 0.5kb upstream 0.5kb upstream 1741 true scaffold_1: 33492592-33494332 Theobroma cacao
Thecc1EG004792 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33493833-33494332 Theobroma cacao
Thecc1EG004792 0.5kb downstream 0.5kb downstream 1741 true scaffold_1: 33492092-33493832 Theobroma cacao
Thecc1EG004792 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33492092-33492591 Theobroma cacao
Thecc1EG004792 1.0kb upstream 1.0kb upstream 2241 true scaffold_1: 33492592-33494832 Theobroma cacao
Thecc1EG004792 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33493833-33494832 Theobroma cacao
Thecc1EG004792 1.0kb downstream 1.0kb downstream 2241 true scaffold_1: 33491592-33493832 Theobroma cacao
Thecc1EG004792 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33491592-33492591 Theobroma cacao
Thecc1EG004792 2.0kb upstream 2.0kb upstream 3241 true scaffold_1: 33492592-33495832 Theobroma cacao
Thecc1EG004792 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33493833-33495832 Theobroma cacao
Thecc1EG004792 2.0kb downstream 2.0kb downstream 3241 true scaffold_1: 33490592-33493832 Theobroma cacao
Thecc1EG004792 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33490592-33492591 Theobroma cacao
Thecc1EG004792 5.0kb upstream 5.0kb upstream 6241 true scaffold_1: 33492592-33498832 Theobroma cacao
Thecc1EG004792 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33493833-33498832 Theobroma cacao
Thecc1EG004792 5.0kb downstream 5.0kb downstream 6241 true scaffold_1: 33487592-33493832 Theobroma cacao
Thecc1EG004792 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33487592-33492591 Theobroma cacao
Thecc1EG004792 10.0kb upstream 10.0kb upstream 11241 true scaffold_1: 33492592-33503832 Theobroma cacao
Thecc1EG004792 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33493833-33503832 Theobroma cacao
Thecc1EG004792 10.0kb downstream 10.0kb downstream 11241 true scaffold_1: 33482592-33493832 Theobroma cacao
Thecc1EG004792 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33482592-33492591 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831219 5264 Brassicales-Malvales View MSA
124339223 5266 SBM View MSA
124253306 5268 Malvidae View MSA
124067301 5270 Rosid View MSA
123752921 5271 Pentapetalae View MSA
122791462 5272 Eudicot View MSA
122050210 5273 Angiosperm View MSA
121350546 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain