Gene : Thecc1EG004787 T. cacao v1.1
Defline:  (1 of 2) PTHR30620//PTHR30620:SF4 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // BETA-D-XYLOSIDASE 2-RELATED Genomic Order:  3100
Name:  ? Thecc1EG004787 Secondary Identifier:  ? PAC:27436755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004787 0.5kb upstream 0.5kb upstream 6068 true scaffold_1: 33467778-33473845 Theobroma cacao
Thecc1EG004787 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33473346-33473845 Theobroma cacao
Thecc1EG004787 0.5kb downstream 0.5kb downstream 6068 true scaffold_1: 33467278-33473345 Theobroma cacao
Thecc1EG004787 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33467278-33467777 Theobroma cacao
Thecc1EG004787 1.0kb upstream 1.0kb upstream 6568 true scaffold_1: 33467778-33474345 Theobroma cacao
Thecc1EG004787 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33473346-33474345 Theobroma cacao
Thecc1EG004787 1.0kb downstream 1.0kb downstream 6568 true scaffold_1: 33466778-33473345 Theobroma cacao
Thecc1EG004787 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33466778-33467777 Theobroma cacao
Thecc1EG004787 2.0kb upstream 2.0kb upstream 7568 true scaffold_1: 33467778-33475345 Theobroma cacao
Thecc1EG004787 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33473346-33475345 Theobroma cacao
Thecc1EG004787 2.0kb downstream 2.0kb downstream 7568 true scaffold_1: 33465778-33473345 Theobroma cacao
Thecc1EG004787 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33465778-33467777 Theobroma cacao
Thecc1EG004787 5.0kb upstream 5.0kb upstream 10568 true scaffold_1: 33467778-33478345 Theobroma cacao
Thecc1EG004787 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33473346-33478345 Theobroma cacao
Thecc1EG004787 5.0kb downstream 5.0kb downstream 10568 true scaffold_1: 33462778-33473345 Theobroma cacao
Thecc1EG004787 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33462778-33467777 Theobroma cacao
Thecc1EG004787 10.0kb upstream 10.0kb upstream 15568 true scaffold_1: 33467778-33483345 Theobroma cacao
Thecc1EG004787 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33473346-33483345 Theobroma cacao
Thecc1EG004787 10.0kb downstream 10.0kb downstream 15568 true scaffold_1: 33457778-33473345 Theobroma cacao
Thecc1EG004787 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33457778-33467777 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833925 5264 Brassicales-Malvales View MSA
124340933 5266 SBM View MSA
124254430 5268 Malvidae View MSA
124068903 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain