Gene : Thecc1EG005005 T. cacao v1.1
Defline:  Uncharacterized protein (58%P) Genomic Order:  3285
Name:  ? Thecc1EG005005 Secondary Identifier:  ? PAC:27433263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005005 0.5kb upstream 0.5kb upstream 2008 true scaffold_1: 34560236-34562243 Theobroma cacao
Thecc1EG005005 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34561744-34562243 Theobroma cacao
Thecc1EG005005 0.5kb downstream 0.5kb downstream 2008 true scaffold_1: 34559736-34561743 Theobroma cacao
Thecc1EG005005 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34559736-34560235 Theobroma cacao
Thecc1EG005005 1.0kb upstream 1.0kb upstream 2508 true scaffold_1: 34560236-34562743 Theobroma cacao
Thecc1EG005005 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34561744-34562743 Theobroma cacao
Thecc1EG005005 1.0kb downstream 1.0kb downstream 2508 true scaffold_1: 34559236-34561743 Theobroma cacao
Thecc1EG005005 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34559236-34560235 Theobroma cacao
Thecc1EG005005 2.0kb upstream 2.0kb upstream 3508 true scaffold_1: 34560236-34563743 Theobroma cacao
Thecc1EG005005 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34561744-34563743 Theobroma cacao
Thecc1EG005005 2.0kb downstream 2.0kb downstream 3508 true scaffold_1: 34558236-34561743 Theobroma cacao
Thecc1EG005005 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34558236-34560235 Theobroma cacao
Thecc1EG005005 5.0kb upstream 5.0kb upstream 6508 true scaffold_1: 34560236-34566743 Theobroma cacao
Thecc1EG005005 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34561744-34566743 Theobroma cacao
Thecc1EG005005 5.0kb downstream 5.0kb downstream 6508 true scaffold_1: 34555236-34561743 Theobroma cacao
Thecc1EG005005 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34555236-34560235 Theobroma cacao
Thecc1EG005005 10.0kb upstream 10.0kb upstream 11508 true scaffold_1: 34560236-34571743 Theobroma cacao
Thecc1EG005005 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34561744-34571743 Theobroma cacao
Thecc1EG005005 10.0kb downstream 10.0kb downstream 11508 true scaffold_1: 34550236-34561743 Theobroma cacao
Thecc1EG005005 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34550236-34560235 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830342 5264 Brassicales-Malvales View MSA
124346159 5266 SBM View MSA
124236923 5268 Malvidae View MSA
124062435 5270 Rosid View MSA
123741504 5271 Pentapetalae View MSA
122770066 5272 Eudicot View MSA
122043359 5273 Angiosperm View MSA
121310110 5274 Embryophyte View MSA
123347689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain