Gene : Thecc1EG004987 T. cacao v1.1
Defline:  (1 of 1) K01363 - cathepsin B (CTSB) Genomic Order:  3268
Name:  ? Thecc1EG004987 Secondary Identifier:  ? PAC:27431550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004987 0.5kb upstream 0.5kb upstream 4018 true scaffold_1: 34496977-34500994 Theobroma cacao
Thecc1EG004987 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34500495-34500994 Theobroma cacao
Thecc1EG004987 0.5kb downstream 0.5kb downstream 4018 true scaffold_1: 34496477-34500494 Theobroma cacao
Thecc1EG004987 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34496477-34496976 Theobroma cacao
Thecc1EG004987 1.0kb upstream 1.0kb upstream 4518 true scaffold_1: 34496977-34501494 Theobroma cacao
Thecc1EG004987 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34500495-34501494 Theobroma cacao
Thecc1EG004987 1.0kb downstream 1.0kb downstream 4518 true scaffold_1: 34495977-34500494 Theobroma cacao
Thecc1EG004987 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34495977-34496976 Theobroma cacao
Thecc1EG004987 2.0kb upstream 2.0kb upstream 5518 true scaffold_1: 34496977-34502494 Theobroma cacao
Thecc1EG004987 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34500495-34502494 Theobroma cacao
Thecc1EG004987 2.0kb downstream 2.0kb downstream 5518 true scaffold_1: 34494977-34500494 Theobroma cacao
Thecc1EG004987 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34494977-34496976 Theobroma cacao
Thecc1EG004987 5.0kb upstream 5.0kb upstream 8518 true scaffold_1: 34496977-34505494 Theobroma cacao
Thecc1EG004987 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34500495-34505494 Theobroma cacao
Thecc1EG004987 5.0kb downstream 5.0kb downstream 8518 true scaffold_1: 34491977-34500494 Theobroma cacao
Thecc1EG004987 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34491977-34496976 Theobroma cacao
Thecc1EG004987 10.0kb upstream 10.0kb upstream 13518 true scaffold_1: 34496977-34510494 Theobroma cacao
Thecc1EG004987 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34500495-34510494 Theobroma cacao
Thecc1EG004987 10.0kb downstream 10.0kb downstream 13518 true scaffold_1: 34486977-34500494 Theobroma cacao
Thecc1EG004987 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34486977-34496976 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain