Gene : Thecc1EG004912 T. cacao v1.1
Defline:  (1 of 1) PTHR21649//PTHR21649:SF20 - CHLOROPHYLL A/B BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3206
Name:  ? Thecc1EG004912 Secondary Identifier:  ? PAC:27437143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004912 0.5kb upstream 0.5kb upstream 2765 true scaffold_1: 34068162-34070926 Theobroma cacao
Thecc1EG004912 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 34070427-34070926 Theobroma cacao
Thecc1EG004912 0.5kb downstream 0.5kb downstream 2765 true scaffold_1: 34067662-34070426 Theobroma cacao
Thecc1EG004912 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 34067662-34068161 Theobroma cacao
Thecc1EG004912 1.0kb upstream 1.0kb upstream 3265 true scaffold_1: 34068162-34071426 Theobroma cacao
Thecc1EG004912 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 34070427-34071426 Theobroma cacao
Thecc1EG004912 1.0kb downstream 1.0kb downstream 3265 true scaffold_1: 34067162-34070426 Theobroma cacao
Thecc1EG004912 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 34067162-34068161 Theobroma cacao
Thecc1EG004912 2.0kb upstream 2.0kb upstream 4265 true scaffold_1: 34068162-34072426 Theobroma cacao
Thecc1EG004912 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 34070427-34072426 Theobroma cacao
Thecc1EG004912 2.0kb downstream 2.0kb downstream 4265 true scaffold_1: 34066162-34070426 Theobroma cacao
Thecc1EG004912 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 34066162-34068161 Theobroma cacao
Thecc1EG004912 5.0kb upstream 5.0kb upstream 7265 true scaffold_1: 34068162-34075426 Theobroma cacao
Thecc1EG004912 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 34070427-34075426 Theobroma cacao
Thecc1EG004912 5.0kb downstream 5.0kb downstream 7265 true scaffold_1: 34063162-34070426 Theobroma cacao
Thecc1EG004912 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 34063162-34068161 Theobroma cacao
Thecc1EG004912 10.0kb upstream 10.0kb upstream 12265 true scaffold_1: 34068162-34080426 Theobroma cacao
Thecc1EG004912 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 34070427-34080426 Theobroma cacao
Thecc1EG004912 10.0kb downstream 10.0kb downstream 12265 true scaffold_1: 34058162-34070426 Theobroma cacao
Thecc1EG004912 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 34058162-34068161 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815224 5264 Brassicales-Malvales Singleton cluster - no MSA
124311663 5266 SBM Singleton cluster - no MSA
124255272 5268 Malvidae View MSA
124052356 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain