Gene : Thecc1EG005186 T. cacao v1.1

Defline:  (1 of 1) PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Genomic Order:  3434
Name:  ? Thecc1EG005186 Secondary Identifier:  ? PAC:27436192

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005186 0.5kb upstream 0.5kb upstream 4115 true scaffold_1: 35492154-35496268 Theobroma cacao
Thecc1EG005186 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35495769-35496268 Theobroma cacao
Thecc1EG005186 0.5kb downstream 0.5kb downstream 4115 true scaffold_1: 35491654-35495768 Theobroma cacao
Thecc1EG005186 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35491654-35492153 Theobroma cacao
Thecc1EG005186 1.0kb upstream 1.0kb upstream 4615 true scaffold_1: 35492154-35496768 Theobroma cacao
Thecc1EG005186 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35495769-35496768 Theobroma cacao
Thecc1EG005186 1.0kb downstream 1.0kb downstream 4615 true scaffold_1: 35491154-35495768 Theobroma cacao
Thecc1EG005186 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35491154-35492153 Theobroma cacao
Thecc1EG005186 2.0kb upstream 2.0kb upstream 5615 true scaffold_1: 35492154-35497768 Theobroma cacao
Thecc1EG005186 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35495769-35497768 Theobroma cacao
Thecc1EG005186 2.0kb downstream 2.0kb downstream 5615 true scaffold_1: 35490154-35495768 Theobroma cacao
Thecc1EG005186 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35490154-35492153 Theobroma cacao
Thecc1EG005186 5.0kb upstream 5.0kb upstream 8615 true scaffold_1: 35492154-35500768 Theobroma cacao
Thecc1EG005186 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35495769-35500768 Theobroma cacao
Thecc1EG005186 5.0kb downstream 5.0kb downstream 8615 true scaffold_1: 35487154-35495768 Theobroma cacao
Thecc1EG005186 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35487154-35492153 Theobroma cacao
Thecc1EG005186 10.0kb upstream 10.0kb upstream 13615 true scaffold_1: 35492154-35505768 Theobroma cacao
Thecc1EG005186 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35495769-35505768 Theobroma cacao
Thecc1EG005186 10.0kb downstream 10.0kb downstream 13615 true scaffold_1: 35482154-35495768 Theobroma cacao
Thecc1EG005186 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35482154-35492153 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833774 5264 Brassicales-Malvales View MSA
124342171 5266 SBM View MSA
124243129 5268 Malvidae View MSA
124060800 5270 Rosid View MSA
123736639 5271 Pentapetalae View MSA
122792131 5272 Eudicot View MSA
122046585 5273 Angiosperm View MSA
121348167 5274 Embryophyte View MSA
123380754 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain