Gene : Thecc1EG005162 T. cacao v1.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF527 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Genomic Order:  3414
Name:  ? Thecc1EG005162 Secondary Identifier:  ? PAC:27436437
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005162 0.5kb upstream 0.5kb upstream 5128 true scaffold_1: 35372066-35377193 Theobroma cacao
Thecc1EG005162 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35376694-35377193 Theobroma cacao
Thecc1EG005162 0.5kb downstream 0.5kb downstream 5128 true scaffold_1: 35371566-35376693 Theobroma cacao
Thecc1EG005162 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35371566-35372065 Theobroma cacao
Thecc1EG005162 1.0kb upstream 1.0kb upstream 5628 true scaffold_1: 35372066-35377693 Theobroma cacao
Thecc1EG005162 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35376694-35377693 Theobroma cacao
Thecc1EG005162 1.0kb downstream 1.0kb downstream 5628 true scaffold_1: 35371066-35376693 Theobroma cacao
Thecc1EG005162 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35371066-35372065 Theobroma cacao
Thecc1EG005162 2.0kb upstream 2.0kb upstream 6628 true scaffold_1: 35372066-35378693 Theobroma cacao
Thecc1EG005162 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35376694-35378693 Theobroma cacao
Thecc1EG005162 2.0kb downstream 2.0kb downstream 6628 true scaffold_1: 35370066-35376693 Theobroma cacao
Thecc1EG005162 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35370066-35372065 Theobroma cacao
Thecc1EG005162 5.0kb upstream 5.0kb upstream 9628 true scaffold_1: 35372066-35381693 Theobroma cacao
Thecc1EG005162 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35376694-35381693 Theobroma cacao
Thecc1EG005162 5.0kb downstream 5.0kb downstream 9628 true scaffold_1: 35367066-35376693 Theobroma cacao
Thecc1EG005162 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35367066-35372065 Theobroma cacao
Thecc1EG005162 10.0kb upstream 10.0kb upstream 14628 true scaffold_1: 35372066-35386693 Theobroma cacao
Thecc1EG005162 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35376694-35386693 Theobroma cacao
Thecc1EG005162 10.0kb downstream 10.0kb downstream 14628 true scaffold_1: 35362066-35376693 Theobroma cacao
Thecc1EG005162 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35362066-35372065 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838813 5264 Brassicales-Malvales View MSA
124348165 5266 SBM View MSA
124239659 5268 Malvidae View MSA
124050847 5270 Rosid View MSA
123745876 5271 Pentapetalae View MSA
122785866 5272 Eudicot View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain