Gene : Thecc1EG005158 T. cacao v1.1
Defline:  (1 of 1) K08334 - beclin 1 (BECN1, VPS30, ATG6) Genomic Order:  3411
Name:  ? Thecc1EG005158 Secondary Identifier:  ? PAC:27435335
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005158 0.5kb upstream 0.5kb upstream 5078 true scaffold_1: 35360137-35365214 Theobroma cacao
Thecc1EG005158 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 35360137-35360636 Theobroma cacao
Thecc1EG005158 0.5kb downstream 0.5kb downstream 5078 true scaffold_1: 35360637-35365714 Theobroma cacao
Thecc1EG005158 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 35365215-35365714 Theobroma cacao
Thecc1EG005158 1.0kb upstream 1.0kb upstream 5578 true scaffold_1: 35359637-35365214 Theobroma cacao
Thecc1EG005158 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 35359637-35360636 Theobroma cacao
Thecc1EG005158 1.0kb downstream 1.0kb downstream 5578 true scaffold_1: 35360637-35366214 Theobroma cacao
Thecc1EG005158 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 35365215-35366214 Theobroma cacao
Thecc1EG005158 2.0kb upstream 2.0kb upstream 6578 true scaffold_1: 35358637-35365214 Theobroma cacao
Thecc1EG005158 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 35358637-35360636 Theobroma cacao
Thecc1EG005158 2.0kb downstream 2.0kb downstream 6578 true scaffold_1: 35360637-35367214 Theobroma cacao
Thecc1EG005158 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 35365215-35367214 Theobroma cacao
Thecc1EG005158 5.0kb upstream 5.0kb upstream 9578 true scaffold_1: 35355637-35365214 Theobroma cacao
Thecc1EG005158 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 35355637-35360636 Theobroma cacao
Thecc1EG005158 5.0kb downstream 5.0kb downstream 9578 true scaffold_1: 35360637-35370214 Theobroma cacao
Thecc1EG005158 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 35365215-35370214 Theobroma cacao
Thecc1EG005158 10.0kb upstream 10.0kb upstream 14578 true scaffold_1: 35350637-35365214 Theobroma cacao
Thecc1EG005158 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 35350637-35360636 Theobroma cacao
Thecc1EG005158 10.0kb downstream 10.0kb downstream 14578 true scaffold_1: 35360637-35375214 Theobroma cacao
Thecc1EG005158 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 35365215-35375214 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828566 5264 Brassicales-Malvales View MSA
124336523 5266 SBM View MSA
124241580 5268 Malvidae View MSA
124064033 5270 Rosid View MSA
123737768 5271 Pentapetalae View MSA
122791932 5272 Eudicot View MSA
122047778 5273 Angiosperm View MSA
121344553 5274 Embryophyte View MSA
123428819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain